Pairwise Alignments

Query, 1044 a.a., heavy metal efflux pump, cobalt-zinc-cadmium from Dechlorosoma suillum PS

Subject, 1066 a.a., CzcA family heavy metal efflux protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  627 bits (1617), Expect = 0.0
 Identities = 375/1076 (34%), Positives = 597/1076 (55%), Gaps = 60/1076 (5%)

Query: 1    MLAKIIEWSGRNRFLVLLATLFIIVAGVVAVVRTPLDALPDLSDVQVIVYTEYPGQAPQV 60
            ML K+IE + R+R +VL+  +  + A  V + +  LDA PD+++VQV V T   G A + 
Sbjct: 1    MLQKLIEQAVRSRLIVLIFLIGAMAAAAVMLPKLNLDAFPDVTNVQVQVNTAAEGLAAEE 60

Query: 61   VEDQVTYPLTSAMLSVPKSKVVRGFSFFGASFVYIIFEDGTDIYWARSRVLEYLNFAAGR 120
            VE  ++YP+ SAM ++P    VR  S  G S V ++FE+GTDIY+AR +V E L  A   
Sbjct: 61   VEKLISYPVESAMYALPSVTEVRSLSRTGLSIVTVVFEEGTDIYFARQQVFEQLQAAREA 120

Query: 121  MPKGV-TPQIGPDATGVGWVYQYAVLAKNKTLA---ELRTLQDWYLRYQLTKAHGVAEVA 176
            +P GV  P+IGP+ +G+G VYQY + A  ++     ELR+L D+ ++  +    GV +V 
Sbjct: 121  IPDGVGVPEIGPNTSGLGQVYQYILRAAPESGIAPDELRSLNDYLVKLIMMPVGGVTDVL 180

Query: 177  SIGGFVQTYQVTVDPVKLRSYGIPLSKVSQVIRDSNRDVGGRVVEMAETEYMVRGKGYL- 235
            S GG V+ YQV VDP KL SYG+ L  V++ +  +NR+ GG  +   + + +VRG G L 
Sbjct: 181  SFGGEVRQYQVQVDPAKLLSYGLKLDDVTRALEGNNRNAGGWFMAKGQEQLVVRGYGLLP 240

Query: 236  ---RGTADIENLVVKAQGGTPVMIRDIARVELAPDERRGLTELNGE---------GEVVS 283
                G   I  + +    GTPV I D+A+V    + R G   +            GEVV+
Sbjct: 241  AGEAGLDAIAQIPLTEWQGTPVRIMDVAQVAFGSEIRVGAVTMTRRDEAGSPQVLGEVVA 300

Query: 284  GIAMARYGQNALEVIHNLKEKIGEISSGLPEGVTIETVYDRSELIHRAIDTLKHTLAEES 343
            G+ + R G N    I ++  +   I   LP+GVT E  YD+S+L+ +A+ T++  L    
Sbjct: 301  GVILKRMGANTKATIDDINSRTALIQQALPDGVTFEVFYDQSDLVTKAVTTVRDALLLAF 360

Query: 344  VIVALVCVVFLLHLRSALVAILMLPVGVLISFISMRLLGMNSNLMSLGGIAIAIGAMIDA 403
            + +  V  +FL+++R+  + +L +PV + ++ + M   GM++NLMSLGG+A+AIG ++D 
Sbjct: 361  MFIVAVLALFLVNVRATALVLLSIPVSIALALMVMSYFGMSANLMSLGGLAVAIGMLVDG 420

Query: 404  AIVMIENAHKHIER--------------LPENHSHSERVEAMIA-----ACKEVGPALFF 444
            ++VM+EN  +H+ +              L E  +H E     IA     A +EV   +FF
Sbjct: 421  SVVMVENIFRHLTQPEGRVDNGLPTDPGLSEEDAHREGGYGGIAMRILQAAREVCSPIFF 480

Query: 445  SLLIITVSFLPVFTLEAQEGRLFSPLAYTKTFSMAGAALLSVTLVPVL-MMLFIRGKIMP 503
            + LII V F P+F LE  EG+LF P+A +   +M  A ++++ +VP L + LF RG  + 
Sbjct: 481  ATLIIIVVFAPLFALEGVEGKLFQPMAVSIILAMLSALMVALVVVPALAVYLFRRGVHLR 540

Query: 504  EAK--NPVNRFLIWGYRPIIAWVMRRKTATIIAAIVAMLISIYPASKLGSEFMPTLNEGT 561
            ++    P+++    GYR ++  VM R     I A+V   +S+    +LG+EF+P L EGT
Sbjct: 541  QSPLLTPIDK----GYRRVLGAVMARPKTVGITALVLFGLSMALLPRLGTEFVPELEEGT 596

Query: 562  LLYMPASLPGMSITKAAELLQTQNKIIKSFPEVASVYGKAGRANTATDPAPTEMFETVIN 621
            +       P  S+  +  +      ++  FPEV     + G      DP P    E  I 
Sbjct: 597  INLRVTLAPTASLDTSLMVAPKLEAMLMEFPEVDYALSRIGAPELGGDPEPVSNIEIYIG 656

Query: 622  LKPESEWRQGMTTDKLIAEMDKALQ-FPGVSNAWTMPIKARIDMLSTGIRTPIGIKVFGK 680
            LKP  EW+   +  +L   M++ L  FPG+   ++ PI  R+D L +G++  + IK+FG 
Sbjct: 657  LKPIDEWQSAASRAELQRLMEEKLSVFPGLLFTFSQPIATRVDELLSGVKAQLAIKLFGP 716

Query: 681  DLSEMESLAREIETVVKEVPGTTSAFAERITGGYYLNIEPDRTQLARYGLAVGELQDVIG 740
            DL  +    +++  +V +VPG      E+++G   L + PDR +LARYG++V E+ +++ 
Sbjct: 717  DLDVLAEKGQQLSELVSKVPGAVDVSLEQVSGEAQLVVRPDRARLARYGISVDEVMNLVS 776

Query: 741  QALGGEMVTTTVEGRERFGVTVRYPRELRSDPQQIAQQVLVPTADGAMIPLGQLAKVQVA 800
              +GG      ++G  R+ + VR   + R+    IA  +LV  A+GA + LG++A V V 
Sbjct: 777  TGIGGSDAGQVIDGNARYDINVRLKADTRASADAIADLLLV-GANGARVRLGEVADVVVE 835

Query: 801  KGTPGIRTENALLSAYIFVDIRDRDIGGYVADAKKAVAEKVKFPPGYYATWSGQFESMER 860
               P IR ++      +  ++  RD+G  V D    V E    PPGY  +  GQ+E+ +R
Sbjct: 836  MAPPNIRRDDVQRRVVVQANVSGRDMGSVVKDIYALVPE-ADLPPGYTVSVGGQYENQQR 894

Query: 861  AIEKMKVVVPVTLLIIFLLLYLNFKRLTETLIVMLSVPFALVGGVWLMWLLGYNLSVAVA 920
            A  ++ +VVPV++ +I LLLY +F  L +  ++M +VP AL+GGV  +++ G  LSV  +
Sbjct: 895  AQARLMLVVPVSIGLIALLLYFSFGALKQVGLIMANVPLALIGGVVALYVSGTYLSVPSS 954

Query: 921  VGFIALAGVAAETGVVMLIYLDHAWEELKTKRRASGQEPSLGDLYEAIMEGAVERVRPKM 980
            +GFI L GVA   GVV++  ++        +RRA G+      LY+A+ EG   R+RP +
Sbjct: 955  IGFITLFGVAVLNGVVLVDSIN--------QRRAGGE-----GLYQAVYEGTAARLRPVL 1001

Query: 981  MTVVAIMAGLLPIMWGTGTGSEVMSRIAAPMVGGMISSTILTLAVIPAIY-ALIKQ 1035
            MT +    GL+PI+  +G GSE+   +A  ++GG+ SST LTL V+P +Y AL +Q
Sbjct: 1002 MTALTSALGLIPILLSSGVGSEIQQPLAVVIIGGLFSSTALTLLVLPTLYMALYRQ 1057