Pairwise Alignments

Query, 1044 a.a., heavy metal efflux pump, cobalt-zinc-cadmium from Dechlorosoma suillum PS

Subject, 1048 a.a., CzcA family heavy metal efflux protein (RefSeq) from Shewanella sp. ANA-3

 Score = 1130 bits (2923), Expect = 0.0
 Identities = 566/1041 (54%), Positives = 770/1041 (73%), Gaps = 11/1041 (1%)

Query: 1    MLAKIIEWSGRNRFLVLLATLFIIVAGVVAVVRTPLDALPDLSDVQVIVYTEYPGQAPQV 60
            M+  II  S  NRFLV++  LF+ + G   ++ TP+DALPDLSDVQVI+ T YPGQAPQ+
Sbjct: 1    MIEWIIRRSVANRFLVMMGALFLSIWGTWTIINTPVDALPDLSDVQVIIKTSYPGQAPQI 60

Query: 61   VEDQVTYPLTSAMLSVPKSKVVRGFSFFGASFVYIIFEDGTDIYWARSRVLEYLNFAAGR 120
            VE+QVTYPLT+ MLSVP +K VRGFS FG S+VY+IFEDGTD+YWARSRVLEYLN   G+
Sbjct: 61   VENQVTYPLTTTMLSVPGAKTVRGFSQFGDSYVYVIFEDGTDLYWARSRVLEYLNQVQGK 120

Query: 121  MPKGVTPQIGPDATGVGWVYQYAVLAKN--KTLAELRTLQDWYLRYQLTKAHGVAEVASI 178
            +P GV+ +IGPDATGVGW+++YA++ ++    L+ELR+LQDW+L+++L     VAEVAS+
Sbjct: 121  LPAGVSSEIGPDATGVGWIFEYALVDRSGKHDLSELRSLQDWFLKFELKTIPNVAEVASV 180

Query: 179  GGFVQTYQVTVDPVKLRSYGIPLSKVSQVIRDSNRDVGGRVVEMAETEYMVRGKGYLRGT 238
            GG V+ YQ+ +DPVKL  YGI L +V Q +  SN++ GG  VE+AE+EYMVR  GYL+  
Sbjct: 181  GGVVKQYQIQLDPVKLTQYGIGLPEVKQALSSSNQEAGGSSVEIAESEYMVRASGYLQTI 240

Query: 239  ADIENLVVKA-QGGTPVMIRDIARVELAPDERRGLTELNGEGEVVSGIAMARYGQNALEV 297
             D +N+V+K  + G PV +RD+AR+++ P+ RRG+ ELNG+GEV  G+ + R G+NA EV
Sbjct: 241  DDFKNIVLKTGENGVPVYLRDVARIQMGPEMRRGIAELNGQGEVAGGVVILRSGKNAREV 300

Query: 298  IHNLKEKIGEISSGLPEGVTIETVYDRSELIHRAIDTLKHTLAEESVIVALVCVVFLLHL 357
            I  +++K+  + + LPEGV I T YDRS+LI RAID L + L EE ++VA+VC +FL H+
Sbjct: 301  ITAVRDKLDTLKASLPEGVEIVTTYDRSQLIDRAIDNLSYKLLEEFIVVAVVCALFLWHV 360

Query: 358  RSALVAILMLPVGVLISFISMRLLGMNSNLMSLGGIAIAIGAMIDAAIVMIENAHKHIER 417
            RSALVAI+ LP+G+ I+FI M   G+N+N+MSLGGIAIA+GAM+DAAIVMIENAHK +E 
Sbjct: 361  RSALVAIISLPLGLCIAFIVMHFQGLNANIMSLGGIAIAVGAMVDAAIVMIENAHKRLEE 420

Query: 418  LPENH-----SHSERVEAMIAACKEVGPALFFSLLIITVSFLPVFTLEAQEGRLFSPLAY 472
                H      ++ R + +  A  EVGPALF SLLIIT+SF+P+FTLE QEGRLF PLA+
Sbjct: 421  WDHQHPGEQIDNATRWKVITDASVEVGPALFISLLIITLSFIPIFTLEGQEGRLFGPLAF 480

Query: 473  TKTFSMAGAALLSVTLVPVLMMLFIRGKIMPEAKNPVNRFLIWGYRPIIAWVMRRKTATI 532
            TKT+SMAGAA+L++ ++P+LM  +IRGKI  E  NP+NR LI  Y P++  V+     T+
Sbjct: 481  TKTYSMAGAAILAIIVIPILMGFWIRGKIPAETSNPLNRLLIKAYHPLLLRVLHWPKTTL 540

Query: 533  IAAIVAMLISIYPASKLGSEFMPTLNEGTLLYMPASLPGMSITKAAELLQTQNKIIKSFP 592
            + A +++   I+P S++G EF+P +NEG LLYMP++LPG+S  +AA LLQT +K+IK+ P
Sbjct: 541  LVAALSIFTVIWPLSQVGGEFLPKINEGDLLYMPSTLPGVSPGEAAALLQTTDKLIKTVP 600

Query: 593  EVASVYGKAGRANTATDPAPTEMFETVINLKPESEWRQGMTTDKLIAEMDKALQFPGVSN 652
            EVASV+GK G+A TATD AP EM ET I LKPE +WR GMT DK+I E+D+ ++ PG++N
Sbjct: 601  EVASVFGKTGKAETATDSAPLEMMETTIQLKPEDQWRPGMTIDKIIEELDRTVRLPGLAN 660

Query: 653  AWTMPIKARIDMLSTGIRTPIGIKVFGKDLSEMESLAREIETVVKEVPGTTSAFAERITG 712
             W  PI+ RIDMLSTGI++PIGIKV G  LS+++  A+ IE V K VPG  SA AER+ G
Sbjct: 661  LWVPPIRNRIDMLSTGIKSPIGIKVSGTVLSDIDVTAQSIEAVAKTVPGVVSALAERLEG 720

Query: 713  GYYLNIEPDRTQLARYGLAVGELQDVIGQALGGEMVTTTVEGRERFGVTVRYPRELRSDP 772
            G Y++++ +R + +RYG+ VG++Q  +  A+GG MV  TVEG  R+ + +RYP++ R+ P
Sbjct: 721  GRYIDVDINREKASRYGMTVGDVQLFVSSAIGGAMVGETVEGVARYPINIRYPQDYRNSP 780

Query: 773  QQIAQQVLVPTADGAMIPLGQLAKVQVAKGTPGIRTENALLSAYIFVDIRDRDIGGYVAD 832
            Q + +  ++ T     I LG +A ++V  G   ++TENA  +++I+VD R RD+   V D
Sbjct: 781  QALREMPIL-TPMKQQITLGDVADIKVVSGPTMLKTENARPASWIYVDARGRDMVSVVND 839

Query: 833  AKKAVAEKVKFPPGYYATWSGQFESMERAIEKMKVVVPVTLLIIFLLLYLNFKRLTETLI 892
             K A++EKVK  PG    +SGQFE +E A +K+K++VP+T++IIF+LLYL F+R+ E L+
Sbjct: 840  IKTAISEKVKLRPGTSVAFSGQFELLEHANKKLKLMVPMTVMIIFILLYLAFRRVDEALL 899

Query: 893  VMLSVPFALVGGVWLMWLLGYNLSVAVAVGFIALAGVAAETGVVMLIYLDHAWEELKTKR 952
            +++S+PFALVGG+W ++  G+++SVA   GFIALAGVAAE GVVML+YL HA E      
Sbjct: 900  ILMSLPFALVGGIWFLYWQGFHMSVATGTGFIALAGVAAEFGVVMLMYLRHAIEAHPKLS 959

Query: 953  RASGQEPSLGDLYEAIMEGAVERVRPKMMTVVAIMAGLLPIMWGTGTGSEVMSRIAAPMV 1012
            R     P    L EA+  GAV RVRPK MTV  I+AGLLPI+WGTG GSEVMSRIAAPM+
Sbjct: 960  RKETFTPE--GLDEALYHGAVLRVRPKAMTVAVIVAGLLPILWGTGAGSEVMSRIAAPMI 1017

Query: 1013 GGMISSTILTLAVIPAIYALI 1033
            GGMI++ +L+L +IPA Y LI
Sbjct: 1018 GGMITAPLLSLFIIPAAYKLI 1038