Pairwise Alignments

Query, 412 a.a., ABC-type branched-chain amino acid transport system, periplasmic component from Dechlorosoma suillum PS

Subject, 385 a.a., high-affinity branched-chain amino acid ABC transporter, perisplasmic amino acid binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 68.2 bits (165), Expect = 4e-16
 Identities = 84/324 (25%), Positives = 131/324 (40%), Gaps = 26/324 (8%)

Query: 39  LLAALSLIAGPALAQVRIGVIASSTGVTAQVGIPQKNSVALLPAEI--------GGQK-- 88
           L+  L   A  A   ++IG     TG   +VG   K +  +L  EI        GG+K  
Sbjct: 9   LMLLLMASAAYAADTIKIGFDIPLTGDIPKVGEASKFAAEMLRDEINAKGGLEVGGKKYM 68

Query: 89  VEYFVLDDASDPTNAVTAVKKLIGEHKVDALIGPTTSPAALAMLDFVAEAKTPLVTTVGS 148
           +E+   D+ S P +AV A  KLI   +V A++GP +S  A+       + +TPL++   +
Sbjct: 69  LEFVYEDNESKPESAVNAALKLIERDQVLAIVGPNSSKQAVPAGGVADDNETPLISPWST 128

Query: 149 SAIVQPMDEKKMWVFKTTQNDDLIAEAVI--AHMQASGVRSVGFIGFNDPYGENWHKVF- 205
           +       + + WVF+    D   A  V+  A  Q     +      ++ Y +    +F 
Sbjct: 129 N---PDTTKGRPWVFRAAFLDPFQAPVVVNFASKQFGAKTAAVMFDVSNDYSKGLADIFR 185

Query: 206 AALAEKAGI-RLVASERFVRTDQSVIGQALKLISAKPDAIFIAATGGPAVLPQATLLEKG 264
               EK G   +VA E     DQ    Q  KL++AKPD IF+        L      + G
Sbjct: 186 VKWEEKHGKGTVVAFESHGTKDQDFSAQLTKLLAAKPDFIFLPENYNIVALIVKQAHDLG 245

Query: 265 YKGRLYQTHGVATNDFIKLGGKAVEGTLMAGGPLLVADGLKDGNPIKAVAQGYIRAYEGR 324
           +KG    +    + + + L GK   G   +      A G           + +I  Y  R
Sbjct: 246 WKGPFMGSDAWGSAELMTLCGKDCVGQFFS--THYAAAG------ATGATKEFIDKYTNR 297

Query: 325 YGAGTMSTFGANTYDAGLLLQKAI 348
           YG        A T+DA  ++  AI
Sbjct: 298 YGY-IPDDVAALTWDATRIVLTAI 320