Pairwise Alignments

Query, 412 a.a., ABC-type branched-chain amino acid transport system, periplasmic component from Dechlorosoma suillum PS

Subject, 373 a.a., substrate-binding protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 66.6 bits (161), Expect = 1e-15
 Identities = 87/368 (23%), Positives = 152/368 (41%), Gaps = 34/368 (9%)

Query: 54  VRIGVIASSTGVTAQVGIPQKNSVALLPAEIG------GQKVEYFVLDDASDPTNAVTAV 107
           + +G     TGV + +G+  +N   L    I       G+++E   +DD     +A  A 
Sbjct: 29  ILVGFSGPLTGVNSDLGVQGRNGAQLAIEHINAGGGINGRQLELLSMDDGPTAESARDAD 88

Query: 108 KKLIGEHKVDALIGPTTSPAALAMLDFVAEAKTPLVTTVGSSAIVQPMDEKKMWVFKTTQ 167
             L+ +  V A+IG  TS  A+A L  V +    ++    S+ +   +  K+   F+   
Sbjct: 89  SALLRQGVV-AIIGHMTSNQAIAGLPVVEQHGAVMIAPTVSTPL---LTGKRDGFFRLMP 144

Query: 168 NDDLIAEAVIAHMQASGVRSVGFI--GFNDPYGENWHKVFAALAEKAGIRLVASERFVRT 225
           ++D  A A   +  A G+++V  I    N  +  ++   F    E  G RL+    F   
Sbjct: 145 DNDSWAYATADYALAQGLKTVSVIYETANQAFAGSFVDGFVTQFEAGGGRLLQRIPFTSA 204

Query: 226 DQSVI-GQALKLISAKPDAIFIAATG-GPAVLPQATLLEKGYKGRLYQTHGVATNDFIKL 283
            +  +   A++ +S  PD I +AA+    A L Q        +  L  +    T +    
Sbjct: 205 QRDTLEAAAIRAVSTNPDTIVLAASARDTAALAQFIDAHDSPRPVLLSSSWAYTREIFLA 264

Query: 284 GGKAVEGTLMAGGPLLVADGLKDGNPIKAVAQGYIRAYEGRYGAGTMSTFGANTYDAGLL 343
           GG+AVEG +     L   D  ++G         + +AY  R+G    +   A  Y++   
Sbjct: 265 GGRAVEGIVFTISYL--PDDTREGY------LAFRKAYTERFG-WEPNFAAALAYESA-- 313

Query: 344 LQKAIPLALKKGHPGTAEFRTALRDALEQSKEVVGAQGVFNMTPANHNGMDQRARLMMTV 403
             K +  AL++    T      LR+AL     V   QG+      +  G  QR   ++T+
Sbjct: 314 --KVLAAALRR----TGGRAQGLREALAAGTPV---QGISETVTLDQYGDVQRPPYIVTI 364

Query: 404 QNGRWVPL 411
           +NG +V +
Sbjct: 365 RNGEFVSI 372