Pairwise Alignments

Query, 367 a.a., ABC-type branched-chain amino acid transport system, periplasmic component from Dechlorosoma suillum PS

Subject, 379 a.a., Extracellular ligand-binding receptor (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 81.3 bits (199), Expect = 4e-20
 Identities = 84/369 (22%), Positives = 159/369 (43%), Gaps = 28/369 (7%)

Query: 1   MRKPLAALILLGTLLLAACGEPEPVRIGFLGGLSDRNTDVGDAGRNGVILAVEQWNREGG 60
           ++  L A +L  T   A  G  +PV++G +  LS     +G   R+G +LAV+Q      
Sbjct: 3   LKTTLMAALLAATT--AGAGWADPVKVGMITTLSGGGAGLGIDVRDGFMLAVKQ------ 54

Query: 61  IQGRP-IELIARDDAQKAETAARAAAELGQA-RVEAVIGPFTSAMAAAAVPVLARSDTLL 118
             G P +E++  DD +K + A + A ++ Q+ +V+ + G   S +A A +P         
Sbjct: 55  -AGNPDLEVVIEDDQRKPDIAVQLADKMIQSEKVDVLTGIIFSNLAMAVIPAATAQGKFY 113

Query: 119 ISPTL--SAMAFYAKDDNLVRI---NRSTRDNAGDYARMLYQRGQRRVAVAYDTRNRVFS 173
           +SP    SA+A      N   +   N +  + AG YA     +    +A  Y        
Sbjct: 114 LSPNAGPSALAGRGCHPNYFNVAWQNDNLHEAAGAYANEAGFKNTYILAPNYPA-----G 168

Query: 174 ESWLEEFRRAFTSGGGAIVAEAAYDSQPDTDFAQVVRRLLRNDPDGLLY-IAGAIDVARL 232
           +  L  ++R +    GA+  E  Y     TD+A  + ++  +  D + + + G + ++ L
Sbjct: 169 QDALTGYKRFYE---GALAGEF-YTKLGQTDYAAEIAQIRASGADSVFFFLPGGMGISFL 224

Query: 233 AQQSRRQAPRLPIAASEWAASEQLTELGGSLVEGLLILQNYNRYDESPRYVAFRDAFAQR 292
            Q +      LP+    ++  + + +  G    G+     +N+  ++P  VAF ++F   
Sbjct: 225 KQYAASGVD-LPVVGPAFSFDQGILQAVGEAALGVKNTSQWNKDLDNPANVAFVESFQAE 283

Query: 293 FQRLPGYSAVAAYDAATVLFTALSRRQRGDS-VKAAVLKYGPYQGLQQQISFDAFGDTTR 351
           + RLP   A   +D A +L +A+++    D+    A LK   +   +    F       +
Sbjct: 284 YGRLPSLYASQGFDTANLLLSAMAKADVSDTEAFRAALKEADFASTRGDFRFGPNNHPIQ 343

Query: 352 QAFFTEIQQ 360
             +  E+ Q
Sbjct: 344 DIYVREVIQ 352