Pairwise Alignments

Query, 429 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

Subject, 1036 a.a., sensory box protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  138 bits (348), Expect = 7e-37
 Identities = 119/426 (27%), Positives = 199/426 (46%), Gaps = 31/426 (7%)

Query: 12  LQAIYDSSSVGIFLLDMSGRIVHANRRMADLFHYTLDELVGSE--YVSLIHPQEREAGRQ 69
           L  +  S+ +G +  D++  ++  N R AD+   ++DE+  +   ++  IHP +R A   
Sbjct: 332 LSLVLASAELGFWDWDLNNDVIDRNERCADMLGCSVDEMRHNHRIWMDSIHPDDRMA--- 388

Query: 70  NMLNTMARGV-GHVD---VERLYRRRDGSEFWGNLTGKALV-DANGRTTGLVGNIADIDQ 124
            +L ++ R + GH D   VE    R++G   W   TG+ +  D++G+   + G   DI Q
Sbjct: 389 -VLKSIDRHLQGHTDSHNVEYRIIRKNGETLWVRDTGRVMQKDSSGKAIRMCGVHLDITQ 447

Query: 125 --RKRTEWELAASQERFERLARTVPCVLYDYILHGDGDSRFLYLNSRCEEIFEV-PAEVL 181
               + + ELAAS       A +V           D     + +N+   +I    P EVL
Sbjct: 448 VRHNQEQMELAASVYNNSSEAMSVM----------DHKGNIITVNAAFADITGYSPKEVL 497

Query: 182 MANMECFWQLVHPEDLPRLRQEEQAANRSASQFSSEIRILTPSGRQK--WLRLSSRPNVI 239
             ++  F+    P + P    E   A +   ++  E+     +G++   WL +++  +  
Sbjct: 498 GHHISQFYC---PRNKPAFYDEVNQAIKETGRWQGEMWQQHKNGKEYLIWLTVNTIYDAY 554

Query: 240 EPGQSAVWSGFMLDITQAKQLEDELRQLATTDALTGLCNRQSFLRLADQEMARFNRAGNP 299
           +     V      DIT+ K  E  + Q A  D LT L NR+  L   D+E++  +R    
Sbjct: 555 QRPHRRV--ALFSDITEKKAQEQLIWQQANYDPLTKLPNRRMLLDYLDREISLASRQNVR 612

Query: 300 ASVLMLDLDYFKHINDTYGHGVGDAVLRDFSRRTGILLRQVDLFGRIGGEEFCILSPDTD 359
            ++L LDLD+FK +NDT GH +GD +L + + R    +R  D+  R+GG+EF +L  D  
Sbjct: 613 FALLFLDLDFFKEVNDTLGHDMGDKLLIECADRIKACIRDSDVVARLGGDEFTVLIRDIH 672

Query: 360 QDGGLALGQRLCQTIAGQPAHCNGLTIAYTVSIGVTGFRAGDPNFDAVLARADSALYQAK 419
             GG+            +P      +   +VSIG+T F       +A+L  AD A+Y AK
Sbjct: 673 DVGGVERAASNILKAIAEPFQLGPDSAYISVSIGITLFPEDASTREALLKNADQAMYAAK 732

Query: 420 RHGRNQ 425
             GRN+
Sbjct: 733 EQGRNR 738



 Score = 45.4 bits (106), Expect = 8e-09
 Identities = 32/138 (23%), Positives = 64/138 (46%), Gaps = 2/138 (1%)

Query: 7   DDTSLLQAIYDSSSVGIFLLDMSGRIVHANRRMADLFHYTLDELVGSEYVSLIHPQEREA 66
           +   L  ++Y++SS  + ++D  G I+  N   AD+  Y+  E++G  ++S  +    + 
Sbjct: 453 EQMELAASVYNNSSEAMSVMDHKGNIITVNAAFADITGYSPKEVLG-HHISQFYCPRNKP 511

Query: 67  GRQNMLNTMARGVGHVDVERLYRRRDGSEFWGNLTGKALVDANGRTTGLVGNIADIDQRK 126
              + +N   +  G    E   + ++G E+   LT   + DA  R    V   +DI ++K
Sbjct: 512 AFYDEVNQAIKETGRWQGEMWQQHKNGKEYLIWLTVNTIYDAYQRPHRRVALFSDITEKK 571

Query: 127 RTEWELAASQERFERLAR 144
             E +L   Q  ++ L +
Sbjct: 572 AQE-QLIWQQANYDPLTK 588