Pairwise Alignments

Query, 429 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

Subject, 730 a.a., diguanylate cyclase with PAS/PAC sensor (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  208 bits (529), Expect = 5e-58
 Identities = 141/409 (34%), Positives = 208/409 (50%), Gaps = 21/409 (5%)

Query: 28  MSGRIVHANRRMADLFHYTLDELVGSEYVSLIHPQEREAGRQNMLNTMARGVGHVDVERL 87
           + G     N    ++  ++ +EL+   + +L+HP +R +  Q+M     RGV   +VE  
Sbjct: 310 VDGYFRELNPAWQEVLGWSREELLDRPWAALVHPDDRASTMQDMDTLRERGV-ITNVENR 368

Query: 88  YRRRDGSEFWGNLTGKALVDANGRTTGLVGNIADIDQRKRTEWELAASQERFERLARTVP 147
           Y+ RDG+  W +    A V   G   G VG   D+   +R   EL  S+ R   +A TVP
Sbjct: 369 YQCRDGTWRWISWNS-AFVPEQGLIYG-VGR--DVTALRRMVEELRTSEARLRAMAATVP 424

Query: 148 CVLYDYILHGDGDSRFLYLNSRCEEIFEVPAEVLMANMECFWQLVHPEDLPRLRQEEQAA 207
            V+  +     GD +F Y++ R  EI  VP E L+ +       VHP D        + A
Sbjct: 425 GVVLQW-REVPGDRQFTYVSPRSREILGVPPEWLLQDWRAL--PVHPADRTVWELSLRDA 481

Query: 208 NRSASQFSSEIRILTPSGRQKWLRLSSRPNVIEPGQSA----------VWSGFMLDITQA 257
                 +  E R++ P G  +W R  +RP  +  GQS           V+ G + D T+ 
Sbjct: 482 MERRGDWMFEGRLVLPGGEVRWWRGEARP--VHGGQSGAAELPEESGIVYCGIITDTTEH 539

Query: 258 KQLEDELRQLATTDALTGLCNRQSFLRLADQEMARFNRAGNPASVLMLDLDYFKHINDTY 317
           ++ ++ LRQLATTD LTGL NR+ FL   + E+ R  R G P +++ +D+D FK +NDT+
Sbjct: 540 REAQERLRQLATTDGLTGLANRRRFLEALEHEVQRHRRYGTPLALISIDVDRFKRVNDTW 599

Query: 318 GHGVGDAVLRDFSRRTGILLRQVDLFGRIGGEEFCILSPDTDQDGGLALGQRLCQTIAGQ 377
           GH VGD VLR  +      +R VD  GRIGGEEF +L PDT  +  +A+ +RL   +   
Sbjct: 600 GHAVGDEVLRALAGICRAEVRDVDTVGRIGGEEFAVLLPDTAPEEAMAVAERLRAGVEAA 659

Query: 378 PAHCNGLTIAYTVSIGVTGFRAGDPNFDAVLARADSALYQAKRHGRNQV 426
           P       +  T+S+GV+     D   D +L  AD ALY+AK  GRN+V
Sbjct: 660 PLLTTAGPLTVTLSLGVSASPPCD-GADTLLREADRALYRAKAGGRNRV 707



 Score = 35.8 bits (81), Expect = 5e-06
 Identities = 38/156 (24%), Positives = 71/156 (45%), Gaps = 16/156 (10%)

Query: 119 IADIDQRKRTEWELAASQERFERLARTVPCVLYDYILHGDGDSRFLYLNSRCEEIFEVPA 178
           I DI  R R E  L  S++  E +        + +  H   D   +  ++R  E+  +  
Sbjct: 151 IHDITDRVRAEEALRRSEQHLEMVMDGAGIGSFSW--HALTDE--VACDTRWGEVLGLGR 206

Query: 179 EVLMANMECFWQLVHPEDLPRLRQEEQAANRSASQFS----SEIRILTPSGRQKWLRLSS 234
                 ME +  +VHP++LP L   E+A  R  S F+    +E R+    G  +W++ + 
Sbjct: 207 VECAPMMESWRNMVHPDELPGL---ERARRRHLSGFTPRYEAEYRVQGADGAWRWIQETG 263

Query: 235 RPNVIE---PGQSAVWSGFMLDITQAKQLEDELRQL 267
           +  V+E    G     +G + D++  ++ E++ R+L
Sbjct: 264 Q--VVERDGDGLPLRVAGIVCDVSVRRRAEEDRRRL 297