Pairwise Alignments

Query, 429 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

Subject, 721 a.a., diguanylate cyclase from Herbaspirillum seropedicae SmR1

 Score =  151 bits (381), Expect = 7e-41
 Identities = 115/378 (30%), Positives = 188/378 (49%), Gaps = 20/378 (5%)

Query: 55  YVSLIHPQEREAGRQNMLNTMARGVGHVDVERLYRRRDGSEFWGNLTGKALVDANGRTTG 114
           ++ L HP++R   R N ++   R    +D+E    R DG+  W    G  + +ANG+   
Sbjct: 78  FLELTHPEDRTLVR-NHVDACMRERRRIDIEYRIVRADGAVRWVWERGVGIYNANGQVEA 136

Query: 115 LVGNIADIDQRKRTEWELAASQERFERLARTVPCVLYDYILHGDGDSRFLYLNSRCEEIF 174
           + G + D+ +RK    E A + +  ER  R++     + +     D  ++ +N     I+
Sbjct: 137 IEGFLQDVTERK----EAAQALQEAERRYRSIFENAIEGVFQTTPDGTYIAVNPALARIY 192

Query: 175 --EVPAEVLMANMECFWQL-VHPE---DLPRLRQEEQAANRSASQFSSEIRILTPSGRQK 228
               P ++++   +   QL V PE   +  RL +E+     S S F S  R+    G   
Sbjct: 193 GYHSPEDLIVGLRDISHQLYVEPERRQEFMRLMEEQG----SVSNFES--RVYRRDGEII 246

Query: 229 WLRLSSRPNVIEPGQSAVWSGFMLDITQAKQLEDELRQLATTDALTGLCNRQSFLRLADQ 288
           W+  ++R    E G+ + + G +  IT+ K  E E+R  AT DALTGL NR        +
Sbjct: 247 WISENARAVYDEAGKLSCYEGTVEAITERKAHEAEMRHQATHDALTGLPNRNMLHEHLQR 306

Query: 289 EMARFNRAGNPASVLMLDLDYFKHINDTYGHGVGDAVLRDFSRRTGILLRQVDLFGRIGG 348
            +    + G   +V  +DLD FK IND+ GH VGD +L+  ++R    LR+ D+  R GG
Sbjct: 307 ALRVARQKGALTAVAFVDLDQFKFINDSLGHQVGDELLKTVAQRLQACLREADMVARQGG 366

Query: 349 EEF-CILSPDTDQDGGLA-LGQRLCQTIAGQPAHCNGLTIAYTVSIGVTGFRAGDPNFDA 406
           +EF  +L   T+ + G+A + QR+   +A +P          T SIGV+ + A   + ++
Sbjct: 367 DEFVLVLQNQTEGEAGIAEVMQRILAAVA-RPWQAGDREFQVTASIGVSRYPADGKDVES 425

Query: 407 VLARADSALYQAKRHGRN 424
           +L  ADSA+Y+AK  GRN
Sbjct: 426 LLKHADSAMYRAKEQGRN 443



 Score = 42.4 bits (98), Expect = 5e-08
 Identities = 24/91 (26%), Positives = 40/91 (43%)

Query: 176 VPAEVLMANMECFWQLVHPEDLPRLRQEEQAANRSASQFSSEIRILTPSGRQKWLRLSSR 235
           +P ++L+     F +L HPED   +R    A  R   +   E RI+   G  +W+     
Sbjct: 66  LPEDLLLNQRLSFLELTHPEDRTLVRNHVDACMRERRRIDIEYRIVRADGAVRWVWERGV 125

Query: 236 PNVIEPGQSAVWSGFMLDITQAKQLEDELRQ 266
                 GQ     GF+ D+T+ K+    L++
Sbjct: 126 GIYNANGQVEAIEGFLQDVTERKEAAQALQE 156