Pairwise Alignments

Query, 577 a.a., Nif-specific regulatory protein from Dechlorosoma suillum PS

Subject, 477 a.a., sigma-54 dependent trancsriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  259 bits (663), Expect = 1e-73
 Identities = 128/242 (52%), Positives = 172/242 (71%)

Query: 202 NVIGRSKRMKEVFADVHQAAPGNSTILLRGESGTGKEAIAHAIHYLSPRSKGPFVKVNCA 261
           +++GRS+ + +V   ++Q A  ++T+L+ G+SGTGKE +A  IHY+S R  GPF+ VNC 
Sbjct: 133 SLVGRSEGIAQVRHLINQVAGSDATVLVLGQSGTGKEVVARNIHYISDRRDGPFIPVNCG 192

Query: 262 ALPETLLESELFGHEKGAFTGATAERKGRFEMADGGTLFLDEIGDISSSFQAKLLRVLQE 321
           A+P  LLESELFGHEKG+FTGA + RKGRFE+A+GGTLFLDEIGD+    Q KLLRVLQE
Sbjct: 193 AIPPELLESELFGHEKGSFTGAISARKGRFELAEGGTLFLDEIGDMPLQMQVKLLRVLQE 252

Query: 322 HEFERVGGNKTHKANFRLVAATNRNLEEMVQKGDFRADLYFRLNVVAILLPPLRERKEDI 381
             FERVGG+K    N R++AAT+R LE M+  G+FR DL++RLNV  + +P L ERK+DI
Sbjct: 253 RVFERVGGSKPIHTNVRVIAATHRELETMIANGEFREDLFYRLNVFPVEMPALCERKDDI 312

Query: 382 PLLVDFFLSRFNRENNRKLTITPGAVEILQHCNWPGNVRELENCIERAATMTRGALIRES 441
           PLL+   +SR   E   K+  T  A+E L+  +W GNVREL N +ER   +  G L+  +
Sbjct: 313 PLLLQELVSRVYNEGRGKVRFTQRAIESLKEHSWSGNVRELSNLVERLTILYPGGLVDVN 372

Query: 442 DM 443
           D+
Sbjct: 373 DL 374