Pairwise Alignments

Query, 669 a.a., DNA/RNA helicase, superfamily I from Dechlorosoma suillum PS

Subject, 723 a.a., DNA helicase II from Vibrio cholerae E7946 ATCC 55056

 Score =  380 bits (977), Expect = e-110
 Identities = 247/661 (37%), Positives = 370/661 (55%), Gaps = 17/661 (2%)

Query: 7   LHSLNPPQREAIYYLDGPLLVLAGAGSGKTRVITQKIAYLIQECGMNPANIAAITFTNKA 66
           L  LN  QREA+      LL+LAGAGSGKTRV+  +IA+L+     +P ++ A+TFTNKA
Sbjct: 8   LDGLNDKQREAVAAPLENLLILAGAGSGKTRVLVHRIAWLMSVEEASPFSVMAVTFTNKA 67

Query: 67  AREMQERVGQLLQGGSTAGLTICTFHSLGVRILREEAKALGYKPKFSIFDSTDCYSIFAD 126
           A EM+ R+ +L+ G + +G+   TFH +  RILR           F I DS D   +   
Sbjct: 68  AAEMRGRIEELMHG-TASGMWCGTFHGICHRILRAHYLDAKLLEDFQIIDSDDQQRLLKR 126

Query: 127 LSASVD----KATIRSIQWLVSGWKNAMKSPDQAAAEAKSEIEVLAAKAYRDYAATLKAY 182
           L  + +    +   R + W ++  K+    P      A   +     K Y  Y       
Sbjct: 127 LIKAHNLDDKQWPARQVAWWINNQKDEGLRPTHI--NAFDPVTQTYLKLYTAYQEACDRA 184

Query: 183 QAVDFDDLILLPMQLFQEHPKIRDKWQNRLRYLLVDEYQDTNACQYQLLKLLTGPRAMFT 242
             VDF +++L  ++L + +  IR+ +Q R +++LVDE+QDTNA QY  L+++ G ++   
Sbjct: 185 GLVDFAEILLRALELLRGNQHIREHYQARFKHILVDEFQDTNAIQYAWLRMMAGAQSNVM 244

Query: 243 AVGDDDQAIYGWRGADVENLRGLPRDYPNLKLIMLEQNYRSTARILQAANNVIGNNEKLF 302
            VGDDDQ+IYGWRGA VEN+    R++P++  I LEQNYRST  IL+A+N +I NN +  
Sbjct: 245 IVGDDDQSIYGWRGARVENIEKFTREFPSVNTIRLEQNYRSTKTILEASNTLIANNSERM 304

Query: 303 EKKLWSDLGHGEAIRGSVCRDNEHEAESVVMKLLADKFEKRSKFSDYAILYRSNHQARLF 362
            K+LW+D   GE I      +   EA  VV K+   + E+    +D AILYR+N Q+R+ 
Sbjct: 305 GKQLWTDGLVGEPISVYSAYNELDEARFVVSKIKGWQ-EQGGTLTDCAILYRNNAQSRVL 363

Query: 363 ETHLRNNRVPYVMSGGTSFFEKSEIKDVIAYLRLLANQDDDPAFIRAVTTPKRGVGGTTL 422
           E  L    + Y + GG  FFE+ EIKD ++YLRL+ N++DD AF R + TP RG+G  TL
Sbjct: 364 EEALLQASLAYRIYGGMRFFERQEIKDALSYLRLINNRNDDTAFERVINTPPRGLGDKTL 423

Query: 423 EALGTYAGERHISLFAAAFEEGFAQRVSHRQLEPLLQFCEFINRVEQRALREPAGEVLND 482
           E +   A +R  +L+ A+      Q ++ R    L +F E IN +E+  +  P   VL D
Sbjct: 424 ETIRFAARDRGCTLWDASVGLLNDQVLTGRAASALSRFVELINALEEEGIDMPL-HVLTD 482

Query: 483 MLTAIGYEAWLYDHEETRAADSKWGNVREF---SQWLAGKGEKDEKTLIDLTQTIALINM 539
                     +Y  E+   + ++  N+ E    ++      E  E T++    T A +  
Sbjct: 483 HAVKTSGLLEMYQQEKGEKSKARIENLEELVTATRQFEKPEEAQEMTMLTAFLTHAALEA 542

Query: 540 LDKQNEDSEFDAVQLSTLHAAKGLEYKNVFLVGVEEGILP-HSSSVESGTVEEERRLMYV 598
            + Q ++ + DAVQL TLH+AKGLE+  VF+VGVEEG+ P   S+ E+G +EEERRL YV
Sbjct: 543 GEGQADEHD-DAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQMSAEEAGRLEEERRLCYV 601

Query: 599 GITRARQHLHLSWCEKRK-QGKEMYPCEPSRFIAEMGNDLRISGGKAAAEPDKATSKARF 657
           G+TRA Q L++++ E R+  G++ Y  +PSRFI E+     +   +  A+  + TS  RF
Sbjct: 602 GMTRAMQKLYITYAEMRRLYGQDKYH-KPSRFIRELPEGC-LDEVRMKAQVSRPTSTGRF 659

Query: 658 A 658
           +
Sbjct: 660 S 660