Pairwise Alignments

Query, 669 a.a., DNA/RNA helicase, superfamily I from Dechlorosoma suillum PS

Subject, 689 a.a., UvrD2 DNA helicase from Sinorhizobium meliloti 1021

 Score =  241 bits (615), Expect = 8e-68
 Identities = 204/651 (31%), Positives = 314/651 (48%), Gaps = 72/651 (11%)

Query: 1   MSSPVPLHSLNPPQREAIYY--------LDGPLLVLAGAGSGKTRVITQKIAYLIQECGM 52
           M++   L  LN  QR A+ Y          GPLL++AGAGSGKT  +  ++A+LI   G 
Sbjct: 1   MATATHLEKLNERQRCAVEYGIGAEEGAQAGPLLIIAGAGSGKTNTLAHRVAHLIVN-GA 59

Query: 53  NPANIAAITFTNKAAREMQERVGQL---LQGGSTAGLTIC-----TFHSLGVRILREEAK 104
           +P  I  +TF+ +AA EM  RV ++   + G S+  +T       TFH +G R+LR  A+
Sbjct: 60  DPRRILLMTFSRRAAAEMSRRVERICAQVLGRSSGMMTDALSWAGTFHGIGARLLRIYAE 119

Query: 105 ALGYKPKFSIFDSTDCYSIFADLSASVDKATIRSIQWLVSGWKNAMKSPDQAAAEAKSEI 164
            +G   +F+I D  D   +   +   +  +   S ++   G   A+ S    A    +E+
Sbjct: 120 QIGLNAEFTIHDREDSADLINLIRHELGFSKTES-RFPTKGTCLAIYSRTVNAEMRLNEV 178

Query: 165 -----------EVLAAKAYRDYAATLKAYQAVDFDDLILLPMQLFQEHPKIRDKWQNRLR 213
                      E    + +  Y    +A   +D+DDL+L   Q+  +   + D   NR  
Sbjct: 179 LRSWYPWVAGWEQQLQELFAGYVEAKQAQNVLDYDDLLLYWAQMVSD-ASLADDIGNRFD 237

Query: 214 YLLVDEYQDTNACQYQLLKLLTGPRAMFTAVGDDDQAIYGWRGADVENLRGLPRDY-PNL 272
           Y+LVDEYQDTN  Q  +L  L       T VGDD Q+IY +R A V N+   P+ + P  
Sbjct: 238 YVLVDEYQDTNKLQSSVLLALKPDGRGLTVVGDDAQSIYSFRAATVRNILDFPKQFAPAA 297

Query: 273 KLIMLEQNYRSTARILQAANNVIGNNEKLFEKKLWSDLGHGEAIRGSVCRDNEHEAESVV 332
           +++ L++NYRST  IL AAN VI    + F K LW+D    E  +    +D   +A  +V
Sbjct: 298 EIVTLDRNYRSTQPILAAANGVIDLARERFTKNLWTDRESAERPKLLTVKDEADQANCIV 357

Query: 333 MKLLADKFEKRSKFSDYAILYRSNHQARLFETHLRNNRVPYVMSGGTSFFEKSEIKDVIA 392
            ++LA++ E        A+L+R++  +   E  L    +P+V  GG  F + + +KD++A
Sbjct: 358 EQVLANR-ESGMLLKQQAVLFRTSSHSGPLEVELTRRNIPFVKFGGLKFLDSAHVKDMLA 416

Query: 393 YLRLLANQDDDPAFIRAVTTPKRGVGGTTL-EALGTYAGERHISLFAAAFEEGFAQRVSH 451
            LR   N  D  A  R +     GVG  T  + L T A +    +               
Sbjct: 417 VLRFAQNPRDRVAGFRLLQM-LPGVGPQTAGKILDTIAADPEPLMALGEVPAPPRSGTDW 475

Query: 452 RQLEPLLQFCEFINRVEQRALREPAGEVLNDM-LTAIGYEAWL---YDHEETRAADSKWG 507
             L  LLQ           ALR+P      ++ +  + YE  L   ++  ETR AD    
Sbjct: 476 MSLVELLQ-----------ALRKPGSAWPTEIEMARMWYEPHLERIHEDAETRRAD---- 520

Query: 508 NVREFSQWLAGKGEKD----EKTL--IDLTQTIALINMLDKQNEDSEFDAVQLSTLHAAK 561
            + +  Q  AG   ++    E TL   D T   A + +LD+       D + LST+H+AK
Sbjct: 521 -LVQLEQIAAGYPSRERFLTELTLDPPDATSDQAGVPLLDE-------DYLILSTIHSAK 572

Query: 562 GLEYKNVFLVGVEEGILPHSSSVESGT---VEEERRLMYVGITRARQHLHL 609
           G E+++VF++ V +G +P  S + +GT   +EEERRL+YVG+TRA+  L L
Sbjct: 573 GQEWRSVFMLNVVDGCIP--SDLATGTSHELEEERRLLYVGMTRAKDQLAL 621