Pairwise Alignments

Query, 874 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

Subject, 751 a.a., sensory box protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  475 bits (1223), Expect = e-138
 Identities = 257/591 (43%), Positives = 365/591 (61%), Gaps = 1/591 (0%)

Query: 280 SLSGRQLWVSLVAAPVLDQGGQLLGGIAIVEDATERKRAELQLRQLSRAVEQSPATIVIT 339
           SL    +W+  + AP+ D  G+LLG I    D    K AE QL   S+  E +   ++IT
Sbjct: 158 SLDKGNIWLETIKAPMYDMDGRLLGVIGTTRDIARYKAAEEQLFLTSKVFENAIEGVMIT 217

Query: 340 DTNGVIEYVNPKFTRTTGYSAEEAVGLKPSVLKSGETPLEVYQELWSTIASGGQWEGVFH 399
           D+NG+I  +N  F   TGYS +E +G  P +L SG    + ++ LW  + + G W G   
Sbjct: 218 DSNGIITEINGAFETITGYSRDEVIGKTPKLLNSGRHERDFFENLWRALKTQGHWHGEIW 277

Query: 400 NRRRNGELYWEHATISPITDDNQRITHFVAVKEDITEKRRQEDRIHQLAYFDELTGLPNR 459
           NRR+NG L+ E  +IS +  ++ ++  FVAV  DI+  ++ E  + QLA+ D LT LPNR
Sbjct: 278 NRRKNGTLFAEQTSISAVYGEDGQVRCFVAVFSDISLLKQTEAEVAQLAWHDPLTRLPNR 337

Query: 460 TLLHDRVSQCLAAAEREQETLALLFIDLDNFKTVNDSLGHFTGDRLLQSVAQRLKGCVRD 519
           + L     Q +  A   +  LALL ID+D FK +NDS GH  GD++L S+++RL   +  
Sbjct: 338 SKLTTISQQQIKLAANRKTRLALLLIDVDLFKHINDSFGHLAGDKVLLSLSERLAALLGA 397

Query: 520 SDTVSRLGGDEFVVVLADAQLDGASQVARKIIDRVGQPF-VIDGHQLTVTPSIGISLFPH 578
            DT++R+GGDEFV++    + D    +   I       F   +G  + ++ SIGI+++P 
Sbjct: 398 EDTLARIGGDEFVLLTQVRRRDDIPVILSAIQRAFDTSFDTSEGESVRLSASIGIAVYPD 457

Query: 579 DARDFQSLLKNADTAMYQAKESGRNAYQFFTAEMNVLAFERLVLENALRQAVERQEFVLH 638
           D  +  +LLKNAD AMY+AK+ GRN + F+T +M   + ++L L+ ALR AV+     L 
Sbjct: 458 DGDNPDTLLKNADAAMYRAKQQGRNRHAFYTEQMTQSSMQQLRLQTALRGAVKNSALSLV 517

Query: 639 YQPQVDMGSGRVIGAEALVRWLHPELGMVPPARFIPVAEDSGLIGAIGDWVLYEACRQNR 698
           YQP++++ + ++IG EAL RW   ELG+V PA FIPVAE  GL+  IG WVL EACRQ R
Sbjct: 518 YQPKINLRTRKLIGVEALCRWTDHELGVVSPAEFIPVAESIGLMPEIGLWVLKEACRQAR 577

Query: 699 AWQEAGLPAIPVAVNLSAVQLRQSELHESVAELLRRTGLESRYLELELTERTVMEDAEAT 758
            W++ GL    +AVN+S  QL      +SVA +L +TGL    LELE+TE  V+++  + 
Sbjct: 578 IWRDQGLNPGRMAVNVSGSQLTGDNFADSVARVLTQTGLSPDALELEITESVVLDNPASA 637

Query: 759 VRCLRRLDEMGVMLSIDDFGTGYSSLSYLKRFPIDKLKIDQSFVRDIVADADDQAIAVAI 818
           +  + +L  MGV L++DDFGTGYSSLSYL++ P++KLKIDQSFVR++  D D  AIA+AI
Sbjct: 638 IDTMDKLRGMGVSLALDDFGTGYSSLSYLRKLPLNKLKIDQSFVRELPTDQDSGAIAMAI 697

Query: 819 ISMGHSLRLRVIAEGVETAEQLEILHRHGCDEAQGFHFGRPMPADEFAAYL 869
           I+MG +L+L VIAEGVE   Q E L R GC EAQG+ F RP+ A E    L
Sbjct: 698 IAMGEALKLGVIAEGVENETQAEFLLRLGCTEAQGYLFARPLLASELKQLL 748