Pairwise Alignments

Query, 874 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

Subject, 886 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

 Score =  493 bits (1270), Expect = e-143
 Identities = 268/587 (45%), Positives = 364/587 (62%), Gaps = 10/587 (1%)

Query: 293 APVLDQGGQLLG---GIAIVEDATERKRAELQLRQLSRAVEQSPATIVITDTNGVIEYVN 349
           +P L +  + LG   G AIV +     R +  +R  S A+  +   IVITD  G +E+VN
Sbjct: 291 SPALSRALEALGPRLGEAIVYE-----RGQSLMRLQSAAIAAAANAIVITDGEGRVEWVN 345

Query: 350 PKFTRTTGYSAEEAVGLKPSVLKSGETPLEVYQELWSTIASGGQWEGVFHNRRRNGELYW 409
             +   +GY  ++ +G  P+VL           E W T+ +G  W G  H   R+G  Y 
Sbjct: 346 EAYHLLSGYERDQIIGTLPAVLAGPSAANPTAIEAWPTLRAGQVWRGEIHETHRDGRTYI 405

Query: 410 EHATISPITDDNQRITHFVAVKEDITEKRRQEDRIHQLAYFDELTGLPNRTLLHDRVSQC 469
              TI+PI D + R++H VAV ED+T +++ E+RI  L+ +D LT LPNR L  DR+ Q 
Sbjct: 406 VDKTITPIVDASGRLSHLVAVDEDVTARKKAEERIRYLSNYDTLTRLPNRVLFRDRLYQA 465

Query: 470 LAAAEREQETLALLFIDLDNFKTVNDSLGHFTGDRLLQSVAQRLKGCVRDSDTVSRLGGD 529
           +  A R    LA++FIDLD F  VND+LGH  GD LL ++A R+     ++DTV+R+GGD
Sbjct: 466 VVQARRGHGGLAVMFIDLDQFSLVNDTLGHAAGDHLLMTIASRINAAAEEADTVARVGGD 525

Query: 530 EFVVV-LADAQLDGASQVARKIIDRVGQPFVIDGHQLTVTPSIGISLFPHDARDFQSLLK 588
           EF ++  A    D A+ +AR++ID +  P  + G ++ +  ++GI+++P D  D  +L+K
Sbjct: 526 EFALIQTALTSADSAASLARRLIDVIRTPVDLGGREVVIGANVGIAIYPQDGTDPDNLMK 585

Query: 589 NADTAMYQAKESGRNAYQFFTAEMNVLAFERLVLENALRQAVER-QEFVLHYQPQVDMGS 647
           NAD AMY+A +SG ++  FF+ EMN  A  RL LE  LR+A++   +  LHYQ Q  + S
Sbjct: 586 NADMAMYRAVKSGDDSCCFFSNEMNAEAAVRLSLEEDLRRALDSGDQLFLHYQLQFCIES 645

Query: 648 GRVIGAEALVRWLHPELGMVPPARFIPVAEDSGLIGAIGDWVLYEACRQNRAWQEAGLPA 707
           GR +GAEAL RW HP LG +PP RFIPVAEDSGLI A+GDWVL  A  +   W+ AG   
Sbjct: 646 GRPVGAEALARWTHPTLGAIPPTRFIPVAEDSGLILALGDWVLGTALAEYARWRAAGCGR 705

Query: 708 IPVAVNLSAVQLRQSELHESVAELLRRTGLESRYLELELTERTVMEDAEATVRCLRRLDE 767
           + +AVN+SAVQ RQ  L E V +LL + G+    LELELTE  +M+DA+  V  L  L +
Sbjct: 706 LTIAVNMSAVQFRQKGLVERVTDLLAQHGVPPEDLELELTESMLMQDADQAVAQLTALSQ 765

Query: 768 MGVMLSIDDFGTGYSSLSYLKRFPIDKLKIDQSFVRDIVADADDQAIAVAIISMGHSLRL 827
            G+ LSIDDFGTGYSSL YLK F +DKLK+DQSFVRD+  D +D  IA AII++GHSL L
Sbjct: 766 AGIRLSIDDFGTGYSSLGYLKLFRVDKLKVDQSFVRDVTEDGNDAVIARAIINLGHSLGL 825

Query: 828 RVIAEGVETAEQLEILHRHGCDEAQGFHFGRPMPADEFAAYLARRNA 874
            VIAEGVET EQ+  L R GCD  QG+    P P +  A  L   +A
Sbjct: 826 EVIAEGVETPEQMAYLRREGCDVVQGYLMAYPEPGETVARRLLALDA 872



 Score = 40.0 bits (92), Expect = 6e-07
 Identities = 49/189 (25%), Positives = 79/189 (41%), Gaps = 25/189 (13%)

Query: 148 VRQQGRLAGVLCHEQAGPARPWNEEQRLLGVALANLVSLALEHAALRQSQAQLHSLEERY 207
           +R +G +  VLC              R  G A +  +S ALE    R  +A ++   +  
Sbjct: 271 LRARGEVVAVLC-------------LRGHGEAPSPALSRALEALGPRLGEAIVYERGQSL 317

Query: 208 LRL----LEFCPTGIIHYDTELHITYSNQQFANIIGVPLERLQDLDMAKLQDQRPLPALA 263
           +RL    +      I+  D E  + + N+ +  + G   ER Q +         P  A  
Sbjct: 318 MRLQSAAIAAAANAIVITDGEGRVEWVNEAYHLLSGY--ERDQIIGTLPAVLAGPSAANP 375

Query: 264 AVLEG----RTGR-FEGE-YRASLSGRQLWVSLVAAPVLDQGGQLLGGIAIVEDATERKR 317
             +E     R G+ + GE +     GR   V     P++D  G+L   +A+ ED T RK+
Sbjct: 376 TAIEAWPTLRAGQVWRGEIHETHRDGRTYIVDKTITPIVDASGRLSHLVAVDEDVTARKK 435

Query: 318 AELQLRQLS 326
           AE ++R LS
Sbjct: 436 AEERIRYLS 444