Pairwise Alignments

Query, 874 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

Subject, 1061 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

 Score =  530 bits (1364), Expect = e-154
 Identities = 302/651 (46%), Positives = 397/651 (60%), Gaps = 18/651 (2%)

Query: 226  HITYSNQQFANIIGV--PLERLQDLDMAKLQDQRPL-PALA--AVLEGRTGRFEGEYRAS 280
            H T S++ F    G   P+E    +  A L    PL  ALA  A   G  GR     RA+
Sbjct: 404  HFTSSDEAFIRSNGTRFPVE----VRCAPLTADDPLLKALAHQAPPGGPGGRLAARLRAA 459

Query: 281  LSGRQLWVSLVAAPVLDQGGQLL------GGIAIVEDATERKRAELQLRQLSRAVEQSPA 334
            +  R   +S+  + +      LL        +    D TERK +E  LR+LSRAVEQSPA
Sbjct: 460  MGNRPR-LSVALSRLFGHADALLLPTNPRASVITFVDITERKASEAALRKLSRAVEQSPA 518

Query: 335  TIVITDTNGVIEYVNPKFTRTTGYSAEEAVGLKPSVLKSGETPLEVYQELWSTIASGGQW 394
            +++ITD  G IEYVNP+F ++TGY + E +G  P +LKSG      Y E+W T+  G +W
Sbjct: 519  SVIITDARGTIEYVNPQFEKSTGYRSWEVIGANPRILKSGHIAEATYAEMWKTLNEGREW 578

Query: 395  EGVFHNRRRNGELYWEHATISPITDDNQRITHFVAVKEDITEKRRQEDRIHQLAYFDELT 454
             G  HNRR++G LYWE+A++SP+ D   R TH +AVKEDIT ++  E+R+ + A FDELT
Sbjct: 579  RGELHNRRKDGTLYWEYASLSPVKDRRGRTTHLLAVKEDITARKETENRLIRQANFDELT 638

Query: 455  GLPNRTLLHDRVSQCLAAAEREQETLALLFIDLDNFKTVNDSLGHFTGDRLLQSVAQRLK 514
             LPNR+L + R+ + +  AE     + +LFIDLD+FK VNDSLGH  GD+LL +VAQRL+
Sbjct: 639  DLPNRSLCYSRLKEAIVEAEATASIVGVLFIDLDHFKNVNDSLGHAVGDKLLTAVAQRLR 698

Query: 515  GCVRDSDTVSRLGGDEFVVVLADAQLDGASQ-VARKIIDRVGQPFVIDGHQLTVTPSIGI 573
               R  DT+SR GGDEF+++L D     A   VA+ I+  +  PF IDG ++ +  SIGI
Sbjct: 699  EVARPGDTLSRQGGDEFLMLLPDLNGSEAGHGVAQAILTALAPPFSIDGREIYMAASIGI 758

Query: 574  SLFPHDARDFQSLLKNADTAMYQAKESGRNAYQFFTAEMNVLAFERLVLENALRQAVERQ 633
            + FP D R    LL+NAD+AMY AKESGRNA  FF+ EM + A +RL +E ALRQA+  +
Sbjct: 759  TFFPRDGRSAAELLRNADSAMYTAKESGRNAICFFSPEMEIRAAQRLAIEGALRQALAHE 818

Query: 634  EFVLHYQPQVDMGSGRVIGAEALVRWLHPELGMVPPARFIPVAEDSGLIGAIGDWVLYEA 693
            E  + YQP V     R IGAEAL+RW  P LG V P  FI VAE++GLI  IG WVL +A
Sbjct: 819  ELRVAYQPLVRTSDARPIGAEALLRWTSPTLGEVSPTEFIKVAEETGLIVPIGAWVLDQA 878

Query: 694  CRQNRAWQEAGLPAIPVAVNLSAVQLRQSELHESVAELLRRTGLESRYLELELTERTVME 753
              +    +  G  A  +AVN+S  Q R  +L   V++ L+R    +  LELELTE  +++
Sbjct: 879  VAEAARLRAEGYGAFQIAVNVSVRQFRGGDLAGLVSDTLKRHDFPAAGLELELTESLLLD 938

Query: 754  DAEATVRCLRRLDEMGVMLSIDDFGTGYSSLSYLKRFPIDKLKIDQSFVRDIVADADDQA 813
               A    L+ L  +GV LS+DDFGTGYS+LSYLK FP D LK+D+SF+RDI +  D  A
Sbjct: 939  VTPAITTTLQSLSALGVRLSLDDFGTGYSALSYLKTFPFDILKVDRSFIRDISSAPDSGA 998

Query: 814  IAVAIISMGHSLRLRVIAEGVETAEQLEILHRHGCDEAQGFHFGRPM-PAD 863
            +A AII+M   L L  I EGVET EQ        CD  QGF FG+ M PAD
Sbjct: 999  LARAIIAMARGLGLATIVEGVETEEQCAFARAEDCDIMQGFLFGKAMTPAD 1049



 Score = 33.9 bits (76), Expect = 5e-05
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%)

Query: 302 LLGGIAIVEDATERKRAELQLRQLSRAVEQSPAT-IVITDTNGVIEYVNPKFTRTTGYSA 360
           LL  + ++      +RA L+ R+  RA+  +    + I D  G+I +VN       GYS 
Sbjct: 307 LLAALLLLAQLVNSRRALLREREDMRAITDTMGEGLYILDNEGLIAFVNRSAETMLGYSR 366

Query: 361 EEAVGLK 367
           E+ +G K
Sbjct: 367 EDLLGAK 373