Pairwise Alignments

Query, 303 a.a., hypothetical protein from Dechlorosoma suillum PS

Subject, 291 a.a., preprotein translocase subunit Tim44 from Vibrio cholerae E7946 ATCC 55056

 Score = 95.5 bits (236), Expect = 1e-24
 Identities = 79/310 (25%), Positives = 146/310 (47%), Gaps = 33/310 (10%)

Query: 3   KPLIALCTLVLGLALVAPDADAARLGGGRSSGMQRSVTPQHNTAPSGTTAPKQNAAPAQQ 62
           K L +L  L++    V P A+A + GGG+S G        + TAP    APKQ     Q+
Sbjct: 2   KRLFSLIALIMVSVAVTPIAEAKKFGGGKSFGNN-----SYKTAP----APKQQQ---QK 49

Query: 63  AQPATAGAPAPQAAPKRSWLGPIAG--LAAGIGLAALASHFGFGEGMANFLMIALLAMAA 120
                  A  P ++ K+  +G + G  LA G+    LA+ FG       F+ I ++ + A
Sbjct: 50  NDTVKNDAANPASSAKKGLMGGLLGGLLAGGL----LAAFFGGAFEGIQFMDILIMGLIA 105

Query: 121 VFVFRL----IFRRPAAAAPRSEPLQYAGVGG-----PSMAPLPEVTPVGGGNAAVPAAE 171
             +F+L    +  +  +     +   Y+G+       P++    +   +GGG  +   ++
Sbjct: 106 FVIFKLMRAFLASKQGSINQSQQQPAYSGMNRTPFEQPNVHNFEQPQSMGGGFGSAAQSD 165

Query: 172 AAPAAAVNIPADFDSEGFLRVAKLNFVRLQAANDQGNLDDMREFLAPEMFAEVQLQLSER 231
                  N PA FD   F+  A+ ++  LQ A +   L+ +RE+++P +F +++ + +  
Sbjct: 166 VPH----NYPAGFDRVAFVNGAREHYRILQGAWNHNQLETIREYVSPSLFEDLKAERANY 221

Query: 232 GGKAQQTDVVQLNASLLEVVSETGRHIASVRFNGLLREEKDAAPAPFDEVWHLVKP-TDG 290
            G  Q TDV+ ++A ++    +  R   S++F+G  R+  +      ++VWHL +  T  
Sbjct: 222 EGD-QHTDVMYVDAEIVRADYDANRAQLSLQFSGRYRDAVEGIEENIEDVWHLERDLTVP 280

Query: 291 SRGWMVAGIQ 300
           +  W++ GIQ
Sbjct: 281 NAPWLIVGIQ 290