Pairwise Alignments

Query, 384 a.a., ABC-type branched-chain amino acid transport system, periplasmic component from Dechlorosoma suillum PS

Subject, 405 a.a., Extracellular ligand-binding receptor (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  151 bits (381), Expect = 4e-41
 Identities = 108/394 (27%), Positives = 185/394 (46%), Gaps = 27/394 (6%)

Query: 6   LIAALLPLATGLAAVPAWADINVGVSLAATGPAASLGIPEKNSIALLPTTVA------GQ 59
           L+ A LP AT  AA P    + +G   A +GP A +G P K    +    V       G+
Sbjct: 24  LLGAGLPAATAQAADP----VKIGAFFALSGPTAPVGTPTKLVAQMFVDKVNKEGGINGR 79

Query: 60  KVNYIVLDDATDSTTAVKNIKKLISESKVDLVIGSSTTPSSLAMMDVAVENETPMI-SMA 118
            +  ++ D   D T AV   K+ +SE KV  VIG + T   +A+      +  P + ++ 
Sbjct: 80  PIELVLGDTEGDPTKAVLTFKRFVSEEKVVAVIGPTRTDEGMAVKRQIESSGIPTVMTVG 139

Query: 119 GSAIVVEP----MD-AKRHWVFKSAQNDAHMATAIVEHMTNNNVHSVAFIGFADAYGQGW 173
           G  +++E     MD      VFKS Q  +     ++ ++  + +  VA +   D +GQ  
Sbjct: 140 GDPVIMEGKLGNMDFGTARSVFKSPQRSSTAVRKVLGYLKKHELTKVALLLSGDNFGQDG 199

Query: 174 FKEFAKIAEARKIKIVANESYQRNDTSVTGQTLKILAAKPDAVLVGAAGTPAVLPQKTLK 233
            +    +A    I+IV  E ++  D  +  Q   +    P AV+    G    L  K   
Sbjct: 200 ERWLRSLAPEYGIEIVGTEQFKPTDVDMKTQLTALAGKGPQAVICWTIGPAGALVSKNHH 259

Query: 234 EKGYKGAIYQTHGVANADFLRVGGKDVEGALLPVGPMMVAEQLPNDNPVKKSALEYVKKY 293
             G    + Q HG+ +  ++++ G+  EG L+P   +M  E LP+ +P KK   E+V+ Y
Sbjct: 260 ALGLTMPLLQCHGLPDPAYIKLAGEASEGDLMPATKLMTWEALPDGDPQKKVIAEFVRLY 319

Query: 294 EGVH---GKGSISSFGGHAWDAGVLLSNAIPAALKKAQPGTKEFRKALRDAIEGSKNLPA 350
              +    +  +++  G+AWDA +LL  A+       + GT+  R  +RDA+E ++ L  
Sbjct: 320 RDEYKYDAQYPLNTHSGYAWDALLLLVEAM------RKVGTEPAR--VRDALEATRGLVG 371

Query: 351 AHGIFNMTPQDHQGFDQRARVMVKVENGTWKLIK 384
             G+F + PQDH G  + + VM++V  G + +++
Sbjct: 372 VSGVFTLGPQDHNGLGEDSMVMLQVRGGRFVMVE 405