Pairwise Alignments

Query, 445 a.a., ribosomal RNA small subunit methyltransferase RsmB from Dechlorosoma suillum PS

Subject, 436 a.a., Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) from Pseudomonas fluorescens FW300-N2E2

 Score =  317 bits (812), Expect = 5e-91
 Identities = 195/430 (45%), Positives = 247/430 (57%), Gaps = 18/430 (4%)

Query: 32  LLASAAVAAVQAGR-SLTEVLAQQAKGELGPTRAQAQDLAYGALRRYGWGEAVLAALLQK 90
           L A+ A+AAV +G+ SL   L  Q        R   QDLA+G  R      A+ A LLQK
Sbjct: 5   LAAAKALAAVLSGKASLNSSLPTQLDKVEDRDRGFTQDLAFGTARWQPRLSALAAKLLQK 64

Query: 91  PLP--EPQLQSLLLCALYRLESRPEQSHTVVDQAVAAAATLAKGNFRGVINGVLRSYLRQ 148
           P    +  +++LLL  LY+L      +H  + + V  A  L K   + ++N VLR   R+
Sbjct: 65  PFKAADADVEALLLVGLYQLLYTRVPAHAAIGETVGCADKLKKPWAKALLNAVLRRAQRE 124

Query: 149 RPELLARAAGKPSGAWWHPDWWLSRLRRAYPRDWEAIATAGNGQPPMTLRVNLARGSREE 208
              LLA     P     HP W    L+  +P  WEAI  A N  PPM LRVN    +R+ 
Sbjct: 125 SEALLAELEHDPVVRTAHPRWLQKSLKAFWPEQWEAICAANNAHPPMILRVNRRHHTRDA 184

Query: 209 YQARLDAAGIAAVPLGSA--ALLLQKPVPVDALPGFFDGFVSVQDWGAQRAAELLDARAG 266
           Y A L  AGI A+P   +   ++L+ P  V ALPGF +G++SVQD  AQ AA+LL+   G
Sbjct: 185 YLALLGEAGIPAIPCQYSRDGIVLETPGDVRALPGFAEGWISVQDEAAQLAADLLELAPG 244

Query: 267 QRVLDACAAPGGKTAHILEQ----AGVDLLALDMDGLRCRRVEENLSRLGLRAVVRAADA 322
           QRVLDAC APGGKT HILE     AGV  +A+D++  R  RV+ENL RLGL A + AAD 
Sbjct: 245 QRVLDACCAPGGKTCHILEVEPKLAGV--VAVDLEAKRLVRVKENLERLGLEAELIAADG 302

Query: 323 RCPDDWWDGRPFDRILADVPCSASGVVRRHPDSKWLRRETDIAQFARVQRQILEVLWPTL 382
           R    WWDG+PF RIL D PCSA+GV+RRHPD K  R+  DIA  A +Q ++L+ LW TL
Sbjct: 303 RDTATWWDGKPFQRILLDAPCSATGVIRRHPDIKLTRQPDDIAALAVLQGELLDALWLTL 362

Query: 383 AVGGRLLYATCSVFPEENSQQVSAFLARHGDARRIGIDGADELQLLPGSE-------HDG 435
            VGG LLYATCS  P EN++ + AFLAR   AR + I     L+   G +       HDG
Sbjct: 363 EVGGMLLYATCSTLPTENTEVIEAFLARTPGARELDIASQAGLKQPHGRQLLAQEGGHDG 422

Query: 436 FYYALLEKTA 445
           FYYA L K A
Sbjct: 423 FYYAKLIKIA 432