Pairwise Alignments

Query, 445 a.a., ribosomal RNA small subunit methyltransferase RsmB from Dechlorosoma suillum PS

Subject, 440 a.a., ribosomal RNA small subunit methyltransferase RsmB from Pseudomonas stutzeri RCH2

 Score =  315 bits (806), Expect = 2e-90
 Identities = 198/431 (45%), Positives = 245/431 (56%), Gaps = 19/431 (4%)

Query: 28  ARALLLASAAVAAVQAGRSLTEVLAQQAKGELGPTRAQAQDLAYGALRRYGWGEAVLAAL 87
           ARAL +  +  A++  G SL EVL +    + G T    QDLA+G  R       +   L
Sbjct: 8   ARALSVVLSGKASL--GSSLPEVLGKVDARDRGLT----QDLAFGTARWQPRLAGLADKL 61

Query: 88  LQKPLP--EPQLQSLLLCALYRLESRPEQSHTVVDQAVAAAATLAKGNFRGVINGVLRSY 145
           LQKP    +  +++LLL  LY+L      +H  + + V     L K   +G++N VLR  
Sbjct: 62  LQKPFKAADRDVEALLLVGLYQLFYSRIPAHAAIGETVGCVDKLKKPWAKGLLNAVLRRA 121

Query: 146 LRQRPELLARAAGKPSGAWWHPDWWLSRLRRAYPRDWEAIATAGNGQPPMTLRVNLARGS 205
            R+   LLA     P     HP W    L+  +P  WEAI  A N  PPM LRVN  + S
Sbjct: 122 QREGEALLAELEHDPVIRVAHPRWLQKALKAHWPEHWEAICAANNAHPPMMLRVNRRQVS 181

Query: 206 REEYQARLDAAGIAAVP--LGSAALLLQKPVPVDALPGFFDGFVSVQDWGAQRAAELLDA 263
           R+ Y A L  AGI A P       + L  P  V  LPGF +G VSVQD  AQ AA LLD 
Sbjct: 182 RDGYLAELQGAGIEAHPCEFSEDGIRLAAPCDVHQLPGFAEGRVSVQDEAAQLAASLLDL 241

Query: 264 RAGQRVLDACAAPGGKTAHILEQAG--VDLLALDMDGLRCRRVEENLSRLGLRAVVRAAD 321
             GQRVLDAC APGGKT H+LE+      L+ALD++  R  RV ENL RL L+A + A D
Sbjct: 242 APGQRVLDACCAPGGKTCHLLEREPQLAGLVALDLEPKRLLRVRENLERLHLQAELVADD 301

Query: 322 ARCPDDWWDGRPFDRILADVPCSASGVVRRHPDSKWLRRETDIAQFARVQRQILEVLWPT 381
           AR  + WWDG+PF RIL D PCSA+GV+RRHPD K  R+  DIA  A +Q ++L+ LWPT
Sbjct: 302 ARATERWWDGKPFQRILLDAPCSATGVIRRHPDIKLTRQADDIAPLAALQGEMLDALWPT 361

Query: 382 LAVGGRLLYATCSVFPEENSQQVSAFLARHGDARRIGIDGADEL------QLLP-GSEHD 434
           L VGG LLYATCSV P EN + ++AFL R   AR + + G   L      QLLP  S HD
Sbjct: 362 LEVGGVLLYATCSVLPTENREVIAAFLERTPGARELDLAGGFGLPQMHGRQLLPQESGHD 421

Query: 435 GFYYALLEKTA 445
           GFYYA L K A
Sbjct: 422 GFYYAKLIKIA 432