Pairwise Alignments

Query, 445 a.a., ribosomal RNA small subunit methyltransferase RsmB from Dechlorosoma suillum PS

Subject, 427 a.a., sun protein (RefSeq) from Shewanella loihica PV-4

 Score =  297 bits (761), Expect = 4e-85
 Identities = 179/423 (42%), Positives = 240/423 (56%), Gaps = 14/423 (3%)

Query: 32  LLASAAVAAVQAGRSLTEVLA-QQAKGELGPTRAQAQDLAYGALRRYGWGEAVLAALLQK 90
           L A      ++ G SL+  L  QQ +   G  +A   +L YG +R     + +++  + K
Sbjct: 7   LAARVVFQVLEKGVSLSVALPEQQQRLTSGKDKALLAELCYGVMRHLPQLDKLVSDCMSK 66

Query: 91  PLPEPQ--LQSLLLCALYRLESRPEQSHTVVDQAVAAAATLAKGNFRGVINGVLRSYLRQ 148
           PL   Q  +  LLL   Y+L       H  + +   A   L       V+NGVLR+  R 
Sbjct: 67  PLKGKQRIVHQLLLVGCYQLYFTRIPGHAAISETAEACRQLKFEGLVKVVNGVLRNLQRN 126

Query: 149 RPELLARAAGKPSGAWWHPDWWLSRLRRAYPRDWEAIATAGNGQPPMTLRVNLARGSREE 208
           +  L        + A+  P W + RL+ AYP  W+ +    + +PPM LR N    +RE+
Sbjct: 127 QKPL---PEDNETLAFNTPAWLIKRLKAAYPDSWQEMIAQSHQRPPMWLRNNQLSQTREQ 183

Query: 209 YQARLDAAGIAAVPLGSA-ALLLQKPVPVDALPGFFDGFVSVQDWGAQRAAELLDARAGQ 267
           Y   LD   IAA P  S  A+LL+ P  V  LPGF DG  SVQD  AQ AA LL   A +
Sbjct: 184 YLTLLDEQEIAATPGASNDAILLESPKDVGMLPGFADGVASVQDGAAQWAASLLAPEANE 243

Query: 268 RVLDACAAPGGKTAHILE-QAGVDLLALDMDGLRCRRVEENLSRLGLRAVVRAADARCPD 326
            +LDACAAPGGK+ H+LE Q  +DL+A+D D  R  RV++NL RL L+A +   DA   D
Sbjct: 244 LILDACAAPGGKSCHLLESQPSIDLVAVDFDAKRLERVQQNLDRLSLKAKLVHGDAAKID 303

Query: 327 DWWDGRPFDRILADVPCSASGVVRRHPDSKWLRRETDIAQFARVQRQILEVLWPTLAVGG 386
            WW G  FDRIL D PCSA+GV+RRHPD KWLR++ DI + A +Q QIL+  W  L  GG
Sbjct: 304 SWWQGDKFDRILLDAPCSATGVIRRHPDIKWLRKQADIEELATLQSQILDHCWQWLKPGG 363

Query: 387 RLLYATCSVFPEENSQQVSAFLARHGDARRIGI---DGADEL--QLLPGSEH-DGFYYAL 440
            LLYATCS+ P+EN++Q++AFLAR  DA  I I     +D++  Q+ PG ++ DGFYYA 
Sbjct: 364 TLLYATCSILPQENAEQIAAFLARTQDATLIPIAQQQNSDDIGWQITPGQDNMDGFYYAR 423

Query: 441 LEK 443
           L K
Sbjct: 424 LVK 426