Pairwise Alignments
Query, 445 a.a., ribosomal RNA small subunit methyltransferase RsmB from Dechlorosoma suillum PS
Subject, 429 a.a., sun protein (RefSeq) from Shewanella sp. ANA-3
Score = 288 bits (736), Expect = 3e-82 Identities = 179/423 (42%), Positives = 234/423 (55%), Gaps = 14/423 (3%) Query: 32 LLASAAVAAVQAGRSLTEVLAQQAKG-ELGPTRAQAQDLAYGALRRYGWGEAVLAALLQK 90 L A A ++ G SL+ L +Q K G +A +L YG +R E +A L K Sbjct: 7 LAAKAIFEVLEKGVSLSVALPEQQKHLASGKDKALLAELCYGVMRTLPQIEKRVAECLAK 66 Query: 91 PLPEPQ--LQSLLLCALYRLESRPEQSHTVVDQAVAAAATLAKGNFRGVINGVLRSYLRQ 148 PL Q + LL+ Y+L SH + + A L V+NGVLR+ RQ Sbjct: 67 PLKGKQRIIHQLLIVGCYQLYFTRIPSHAAISETAEACRQLKFEGMVKVVNGVLRNIQRQ 126 Query: 149 RPELLARAAGKPSGAWWHPDWWLSRLRRAYPRDWEAIATAGNGQPPMTLRVNLARGSREE 208 L + + ++ P W + RL+ AYP +W+ I + +PPM LR N SR+ Sbjct: 127 LTPLSTESE---TLSYNTPGWLIKRLKAAYPDNWQEIIQQSHERPPMWLRNNRLSQSRDA 183 Query: 209 YQARLDAAGI-AAVPLGSAALLLQKPVPVDALPGFFDGFVSVQDWGAQRAAELLDARAGQ 267 Y A L I A+ L A+LL P V LP F +G SVQD AQ AA LL +A + Sbjct: 184 YLAALSELEIEASAGLSDDAILLAHPKDVATLPRFHEGAASVQDGAAQWAATLLAPQANE 243 Query: 268 RVLDACAAPGGKTAHILE-QAGVDLLALDMDGLRCRRVEENLSRLGLRAVVRAADARCPD 326 VLDACAAPGGK+ H+LE + + L+A+D D R RV++NL RL L+A V DA D Sbjct: 244 LVLDACAAPGGKSCHLLELEPSIQLVAVDFDAKRLERVQQNLDRLSLKAEVIHGDAANID 303 Query: 327 DWWDGRPFDRILADVPCSASGVVRRHPDSKWLRRETDIAQFARVQRQILEVLWPTLAVGG 386 WW G FDRIL D PCSA+GV+RRHPD KWLR+ DI + A +QRQIL+ W L GG Sbjct: 304 SWWQGEQFDRILLDAPCSATGVIRRHPDIKWLRKNHDIEELAELQRQILDHCWKWLKPGG 363 Query: 387 RLLYATCSVFPEENSQQVSAFLARHGDAR--RIGIDGADE---LQLLPGSEH-DGFYYAL 440 LLYATCS+ P+EN Q+SAFLAR DA+ + + + Q+ PG + DGFYYA Sbjct: 364 TLLYATCSILPQENRDQISAFLARTADAKLDTLAQQASSQDIGWQITPGQHNMDGFYYAR 423 Query: 441 LEK 443 L K Sbjct: 424 LLK 426