Pairwise Alignments

Query, 418 a.a., response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Dechlorosoma suillum PS

Subject, 455 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 96.7 bits (239), Expect = 1e-24
 Identities = 105/415 (25%), Positives = 178/415 (42%), Gaps = 64/415 (15%)

Query: 44  KRPDLVLLDIWMPDTDGISLL---KEWGASGLLTMPVVMMSGHGTIDTAVEATRHGAVEF 100
           + PDL+LLD+ +PD  G+ +L   KE        +P+V M+ HG+IDTAVEA RHGA +F
Sbjct: 39  REPDLILLDLRLPDMTGMDVLYAVKEKSPD----VPIVFMTAHGSIDTAVEAMRHGAQDF 94

Query: 101 LEKPIALQKLLATVKKA------LKHDAQTVKPPLTLDALAKLPLLKDLKKRLEQAAKSA 154
           L KP    +L  TV  A      LK+D    K       +     ++ + + ++ AA S 
Sbjct: 95  LIKPCEADRLRVTVNNAIRKASKLKNDVDN-KNQNYQGFIGSSQTMQAVYRTIDSAASSK 153

Query: 155 PVLLLKGGAGAIADICARTLQAP----HAPWLDL-------------------AAESGPL 191
             + + G +G   ++CA  + A       P++ +                    A +G  
Sbjct: 154 ASIFITGESGTGKEVCAEAIHAASKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAA 213

Query: 192 TQER--LQQASGGILFVPDLAVLG-KLQQMNLAF---------ALERLEKYKLQLVVACH 239
           T+ +   + A GG LF+ +L  +   LQ   L F            +++   ++ V A +
Sbjct: 214 TERQGAAEAADGGTLFLDELCEMDLDLQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATN 273

Query: 240 K-PLQSLLETGWDAALVARLGEVWVALPQLSAHADEVPEIAGLLLSHLMERGEAPARHFS 298
           + P + + E  +   L  RL  + + LP L A  D+V EIA  LL  + +         S
Sbjct: 274 RDPWKEVQEGRFREDLYYRLYVIPLHLPPLRARGDDVIEIAYSLLGFMSKEEGKDFVRLS 333

Query: 299 SAALNALRMHRWSADGWGELQGAVKNLALTALEEEISAEDVAGLLHTTDGEAASTPLE-- 356
           +  +   R + W  +   +LQ  ++N+ +     EI+ + +   L+       S P+   
Sbjct: 334 AEVVERFRQYEWPGN-VRQLQNVLRNVVVLNEGREITLDMLPPPLN-----QMSAPINRA 387

Query: 357 -PLFSQPLREARDAF-----EKLYFEHVLRQEGGNMTRVSERSGVERTHLYRKLK 405
            PL  +      + F     EK   E  +    GN+ R +    V  + +YRKL+
Sbjct: 388 LPLAHENKVSVHEIFPLWMTEKQAIEQAIEACDGNIPRAATYLDVSPSTIYRKLQ 442