Pairwise Alignments

Query, 750 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

Subject, 1484 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) from Shewanella loihica PV-4

 Score =  190 bits (483), Expect = 4e-52
 Identities = 122/333 (36%), Positives = 177/333 (53%), Gaps = 7/333 (2%)

Query: 413  GERTVRWTAVPVHDGSDHISHVALIGHDLTQLREEQRQLWLSDAIVAQTHEAVMVTDASE 472
            G   VR  A+     S  +  VA I  D+T  R  +  + L     A T E V++ DA E
Sbjct: 894  GWTRVRGRALEFDPVSGRVKKVAGIYTDITTQRMLEDDVKLLAQAFANTSEGVLILDADE 953

Query: 473  RIFRVNPAFCLMTGYAPEEVEDHSPGLLASGVHDAEFYHHMHQALQSRGF-WQGEVWQRH 531
            R+   N A   + G + +++ D      A  VH +E        L  +G  W GE   + 
Sbjct: 954  RVRVSNKAAQSILGMSADDLIDR---YFAQLVHSSEDRSDEINILLEQGITWTGEHEFQC 1010

Query: 532  KDGHLFACLLDISTLRDGEGRLTHYVHVFSDITEQKHLAEQMEHLAHFDGLTQLPNRNLF 591
             +G +    L++ST++D  G ++HYV VFSDITE+K     +  LA++D LT LPNR+LF
Sbjct: 1011 AEGLICPVWLNLSTMKDDRGNISHYVAVFSDITERKQTEADLRRLANYDVLTGLPNRSLF 1070

Query: 592  QDRLCQALARAERNGTGLALMFMDLDGFKAVNDSAGHNTGDRLLVEVARRITSVLRKVDS 651
              RL + + RAE+    LAL+F+DLD FK VNDS GH+ GD LLVE A R+ S + +  +
Sbjct: 1071 AARLAKCIHRAEQTEDKLALIFLDLDRFKNVNDSYGHSMGDALLVEAASRLQSCVSENHT 1130

Query: 652  VSRQGGDEFTVLLESLNNGQGIAETEEAARRIIAAINEPVLLDGRSFRVGASIGIAFYPA 711
            + R GGDEF +L+  + +   I E       +I  I +P  L GR F +  SIG++ +P 
Sbjct: 1131 LCRFGGDEFVILMRDMVD---IDEVNHLCEALIRQIEKPFELYGREFFISTSIGVSLWPD 1187

Query: 712  DGDNVELLMARADAAMYQAKARGKNRHLCWTPE 744
            D    E+L+  AD AMY AK  G+     ++ E
Sbjct: 1188 DAKQPEVLIKNADQAMYHAKEEGRGNFQYFSAE 1220