Pairwise Alignments

Query, 1306 a.a., PAS domain S-box from Dechlorosoma suillum PS

Subject, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  546 bits (1407), Expect = e-159
 Identities = 329/838 (39%), Positives = 491/838 (58%), Gaps = 40/838 (4%)

Query: 398  IDRLAAAQEH-MRETLQDATLRLEERVEQRTRELADAREESSRQLVLLQAIMDSMPNPVF 456
            +  L   Q H + + L D ++ ++       + LA+ +     QL   Q I+D+ PNP++
Sbjct: 429  VGMLTMQQYHWLSQMLDDLSVAIQLSQNAEQQRLAERKVLEQSQLN--QEILDATPNPMY 486

Query: 457  FKDAEGRFLGCNRAYEDTFGVGRGQIVGKTVRELPFLSEEEKQELQAVSEAIIRDGIMMH 516
               A+G+FL  N  + D  G+   +++ K  +E+     E  +   A  + + +     +
Sbjct: 487  CLSADGKFLTVNAKFLDLMGLYNNEVIDKEPQEI--FPAEVAERFAAAHQVLTQQQSSQN 544

Query: 517  RELQLPFADGLRHDTLYWANGFSREDGTPGGMVGVVVDISERKLMEEELRRARATAEEAT 576
             E+ L    G++ + L +   FS       G+VG+++D++ERK ME+ELR+A+  A+  +
Sbjct: 545  YEVSLVDYTGVQREMLVYEASFSDRADKVNGIVGILLDMTERKEMEDELRKAKEAADAMS 604

Query: 577  EAKSLFLANMSHEIRTPMNAIIGMAHLAMKTELTPKQRDYVGKIHNAAISLLGIINDILD 636
            +AK  FLANMSHEIRTPMNAI+GMAHLA+ T L   QR YV +I+ +A +LLGIINDILD
Sbjct: 605  QAKGDFLANMSHEIRTPMNAILGMAHLALNTPLDTTQRKYVTRINESAKNLLGIINDILD 664

Query: 637  FSKIEAGKLSLEYVPFSLEDVLDNVSGLLGLKANEKGLELLFNVNAGTPAGLVGDPLRLN 696
            FSK+EAGKL++E + F+L+DVLDNV+ ++ LKA EKG+E L +++   P GL+GDPLRL 
Sbjct: 665  FSKMEAGKLNVERIDFNLDDVLDNVTAVVSLKAQEKGIEFLMDIDPHIPLGLIGDPLRLG 724

Query: 697  QILTNLVSNAIKFTERGQITLTTRPVDQAGDRVKLQFWIEDMGIGMSREQLLHLFQAFTQ 756
            Q++ NL  NA+KFT +G+I L+ R       +V L+F ++D GIG+++++L  LF AF+Q
Sbjct: 725  QVMVNLCGNAVKFTSQGEIVLSARVSQLNEQQVTLRFAVKDTGIGIAQDKLDDLFDAFSQ 784

Query: 757  ADGSTTRKYGGTGLGLSISRRLVEMMGGTIWADSTLGEGSTFCFTAWFGRAEELARPRTL 816
            AD S TR+YGGTGLGLSIS++LVE+MGG I   S  G+GSTF F+   G  +   R  + 
Sbjct: 785  ADNSITRQYGGTGLGLSISKQLVELMGGQITVHSEEGKGSTFEFSVVCGLQDAKMRDISQ 844

Query: 817  PA-SLAGLRVLVADDNGAAREILGEALRHLDLRPDLVASGAEALAQLTEMQGGADPYRVL 875
            P   LA  RVLV DDN +AR IL   L  +      V++G EAL+++ +      P+ +L
Sbjct: 845  PVHGLADKRVLVVDDNDSARHILDSLLTAMRFNVVTVSNGFEALSEIQQ-----KPFDML 899

Query: 876  FLDWQMPDLDGVSTLHKLQQALPQAQWPRVVMVTAYDQEELRRQTENLGICGILVKPVSA 935
            F+DW MP ++G+  L ++ + L      +  +VTAY +E       +  +  ++VKPV+ 
Sbjct: 900  FVDWNMPGMNGIELLTRV-KTLGLRGHMKSFLVTAYGREINLDGENSKLVDALIVKPVNP 958

Query: 936  STLFDVLVSLVDADNA---PATPLHIAAPQTRIDGMRILLAEDNEINQQIAVELLQSMGA 992
            S L D +V+    ++         H + P     G  +LL EDNE+NQ++A+ LLQ  G 
Sbjct: 959  SNLLDAIVTSYGIEHVRHKTNEAHHNSRP--NFAGQSLLLVEDNEVNQEVALGLLQDTGL 1016

Query: 993  QVTVAGDGLQAVELLERSPDDSFDLVLMDLQMPHLDGYDATERLRCQQRFAHLPILAMTA 1052
             V VA  G +A+E LE +    FDLVLMD+QMP +DG  ATE +R   R+  LPI+AMTA
Sbjct: 1017 NVVVANHGQEALERLEHA---DFDLVLMDMQMPVMDGITATEHIRANPRWHSLPIVAMTA 1073

Query: 1053 HAMPEERERCLAIGMNDHLAKPIDPTALAATLARWYE------------ERPGASAPAPT 1100
            +AM  + ERCL  GMNDHL+KPI+       L  + +             +P AS PA  
Sbjct: 1074 NAMAIDIERCLQAGMNDHLSKPIEVDKFYQVLRHFLQVSDEQSFSSHSPNKPSASKPAMN 1133

Query: 1101 PAKDGTDALPPIPGVNTTQGLARMAGNQALYRRLLLRFVDTQTGTGEHIRQALADGDITA 1160
               D    LP + GV+  Q + R+ GNQ  Y  +L  F+D+Q      +   +   D ++
Sbjct: 1134 ALLD----LPQLTGVDLEQAIFRIGGNQQRYFEILRHFIDSQVDELNSVTGLIEAQDWSS 1189

Query: 1161 AEHLAHTLKGVAGNIGAEVLQQKATALDQALRRNDGQG----QKLESLRQRLAEELAA 1214
            A  +AHTLKG A N+G E L Q A  ++Q+L +         Q+ +SL  ++ +EL+A
Sbjct: 1190 ATRVAHTLKGSAANLGLEALAQLAAEMEQSLEQQVLPSFELLQQAQSLLTQVDDELSA 1247