Pairwise Alignments

Query, 2039 a.a., chemotaxis protein histidine kinase-like protein from Dechlorosoma suillum PS

Subject, 704 a.a., CheA signal transduction histidine kinases (RefSeq) from Shewanella sp. ANA-3

 Score =  268 bits (685), Expect = 2e-75
 Identities = 202/693 (29%), Positives = 333/693 (48%), Gaps = 73/693 (10%)

Query: 1263 IFLEEAQELTQSITEQLRLWHDDPHDADVARALARLLHTLKGSARMAGAMNLGELTHTLE 1322
            +F EE+ E  +++ + L        D +    + R  H++KG + + G   L  +TH +E
Sbjct: 11   VFFEESHEHLENMEQLLLALDLAAPDPEELNTIFRAAHSIKGGSGIFGFTALTSVTHVME 70

Query: 1323 TRVEQAHKAG-AAEAALIEEIQIAFDAIAQIVERLASGDTLD-----------------T 1364
              +++  K      +++I+ +    D ++ I+      + +D                  
Sbjct: 71   NLLDKTRKGTFELSSSVIDLLLRTVDTLSHILNLYREEEPIDWQQVEFAKNQLVAALNGE 130

Query: 1365 PLPVELLALPETAEADLAPAMPETQAAPASAEMP--------AAVAQPERPAAEAPATVQ 1416
            P   +   + ETA  +   A+    A+   A             V + E       A   
Sbjct: 131  PFSTQAAKVVETANQEKPAAVSTNSASQEDASFGFFEDEVELGLVDETEHFGFFDEAYTA 190

Query: 1417 VAAAEPEVDAAAASRATLRVRSD-----------LMDRLVNEAGELSIARARIEGEMRSL 1465
                  ++ + AA  AT    SD             +   NE   LS     ++   + +
Sbjct: 191  KEIRVEDIHSNAADSATHAAVSDDELGYGFFESLTAESFANELDALSTPIQNVQVTDKPV 250

Query: 1466 KDSLLDLTE-----------NVIRLRRQLR-EVEIQAETQIQARTA--EAEVAHAGFDPL 1511
              +L++ ++           +  +L+ Q   +V+++A+T + +  A        A    +
Sbjct: 251  YKTLVEQSDAKTARSKKPPKDSAQLKSQATTDVKLEAQTHLASSPAMNTTSATPAASSQV 310

Query: 1512 EFDRFTRFQELTRMMAESVNDVAT-------VQQNLLKNL---------DEANAAIIAQA 1555
                 T  Q+ T  +  S  D          + Q++L  +         +    A+    
Sbjct: 311  AKKASTSTQDATLRVETSKIDTLVNLAGELVITQSMLTLIGNELGGELGERLKTALNELE 370

Query: 1556 RLNRELQQSLMSVRMVPFSSQTERLHRIVRQTAKEVGKRANLEIVGGQVELDRGVLDKMV 1615
            R  RE+Q+++MSVRM+P S    R HR+VR  ++++GK   L I GG  E+D+G+++K+V
Sbjct: 371  RNTREMQEAVMSVRMLPVSFVFNRFHRLVRDLSEQLGKNVTLVIEGGNTEIDKGMIEKLV 430

Query: 1616 APLEHMLRNSVAHGLESREGRLAAGKEEIGEIELKVAQEGNEIIITMADDGAGLDLQRIR 1675
             PL H++RNS+ HG+E  E R+AAGK E+G + LK +Q G  I+I + DDG GL+ +RI 
Sbjct: 431  DPLTHLVRNSLDHGIEKPEKRVAAGKSEVGVLSLKASQRGGSIVIAVHDDGGGLNRERIL 490

Query: 1676 AKAESQGLLAAGEEADDARLADLIFAPGFSTAGEVSQIAGRGVGMDVVRTEVTNLGGRLE 1735
             KA   G +A  E   D ++  LIFA GFSTA EV+ ++GRGVGMDVVR  +  LGGR++
Sbjct: 491  QKARENG-MALPENMTDKQVWQLIFAAGFSTAAEVTDVSGRGVGMDVVRKNIEALGGRID 549

Query: 1736 MQSVAGKGLTFRIYLPLTLAVTQALIVRVGNRRYAIPSAMIAQVQEVKEQVLAGIRETGQ 1795
            + SVAG+G TF I LPLTLA+   + V VGN+ Y +P   I +  + + + L  + +   
Sbjct: 550  IDSVAGEGATFEIQLPLTLAIVDGMSVSVGNQIYILPLVHIIESIQPQTEQLKFLAKERL 609

Query: 1796 VEWLGNRYPYHFLPHLLG-EPQA-LPEARRLSWVLLLRSGTQRAAIQVDELFGNQEIVVK 1853
            +       P   L  L+  EPQA  PEA     V+LL S  +R  + VD L G Q++V+K
Sbjct: 610  LRVREEYLPLLNLYQLMEIEPQAKTPEA---GIVVLLESNNKRFGLCVDALVGQQQVVIK 666

Query: 1854 NVGPQLARVIGIAGATVLGDGQVLLILNPVALA 1886
            ++     R+ G++GAT++GDG V LIL+  +LA
Sbjct: 667  SLEKHYRRIPGVSGATIMGDGSVALILDVESLA 699



 Score = 32.7 bits (73), Expect = 2e-04
 Identities = 16/63 (25%), Positives = 26/63 (41%)

Query: 52  HQVHGALAIVGLDGVTQFTEALEAFLADLESGKRPADDAAVDLVRRSLQAIRHYLDDLLN 111
           H + G   I G   +T  T  +E  L     G      + +DL+ R++  + H L+    
Sbjct: 48  HSIKGGSGIFGFTALTSVTHVMENLLDKTRKGTFELSSSVIDLLLRTVDTLSHILNLYRE 107

Query: 112 GEP 114
            EP
Sbjct: 108 EEP 110



 Score = 32.3 bits (72), Expect = 2e-04
 Identities = 21/86 (24%), Positives = 40/86 (46%)

Query: 691 AELLSIFLEEAQEVLGTIGSHIGLLREQPHNVDFLTTIRRSFHTLKGSGRMVGLKDLGET 750
           AE   +F EE+ E L  +   +  L     + + L TI R+ H++KG   + G   L   
Sbjct: 6   AEFHQVFFEESHEHLENMEQLLLALDLAAPDPEELNTIFRAAHSIKGGSGIFGFTALTSV 65

Query: 751 AWAIEQVLNLWLRQEYDVSPELFALI 776
              +E +L+   +  +++S  +  L+
Sbjct: 66  THVMENLLDKTRKGTFELSSSVIDLL 91