Pairwise Alignments

Query, 395 a.a., putative SAM-dependent methyltransferase from Dechlorosoma suillum PS

Subject, 380 a.a., class I SAM-dependent rRNA methyltransferase from Methanococcus maripaludis S2

 Score =  154 bits (388), Expect = 5e-42
 Identities = 118/357 (33%), Positives = 182/357 (50%), Gaps = 27/357 (7%)

Query: 45  DGKFLARAAYSPDSQIRARVWTFNENETIDDVFFKRRIAEAVARRRNLPELKNEEGVRLL 104
           +G F+A+A Y P   +  ++ T  ENE ID  FF +RI  A   R ++  L  ++  R++
Sbjct: 43  NGNFVAKALYDPKFPL-IKILT-RENEEIDKDFFFKRINNANNYRTDI--LNYKDTYRMI 98

Query: 105 HGESDGLPGVVCDQYGDTLSLQLTSAGGEKWRKAIVNALVQATGCARIYERSD---SDVR 161
           + E+D LP ++ D+Y    S+Q++S   + +   I   + + T    +Y +S    SDV+
Sbjct: 99  YAEADYLPSIILDKYNKIASIQISSKIMDNYSDLIFECISEITDVETMYVQSGKKGSDVK 158

Query: 162 RLEGLEPVTGWLHGEAPAGDLSIMENGVRLLVDVVGGHKTGFYLDQRENRL-LTGALAAG 220
                      + G+    +  I E   +  V++ G HKTGF+LDQR+NR+ L   +  G
Sbjct: 159 TK---------IFGDKSQIETVISEGNAKFNVNMKG-HKTGFFLDQRDNRIDLENYVKPG 208

Query: 221 KSVLNCFCYTGGFSLQA-LAGGAASVLSIDSSGPALETAKRNVTLNPQLDAARAEWWEAD 279
             VL+   YTGGF++ A + GG   V ++D S  AL  A+ N+ LN            ++
Sbjct: 209 DKVLDICSYTGGFAVHAGIKGG--EVTAVDLSEKALAVAEENMELNR---VKNYNCMVSN 263

Query: 280 VFTALRELRKAERKFDLIVLDPPKFAPSAAHADRAARAYKDINLLGFRLLNPGGLLFTYS 339
            F A++E+ K   KFD++VLDPP F  S+     A  AY  +N LG +L     +L T S
Sbjct: 264 AFDAMKEMIKNNEKFDVVVLDPPAFTDSSKDIKNALNAYNSMNYLGLKLAK--RILVTCS 321

Query: 340 CSGGIGNELFQKIIAGAALDAGVDAR-ILRHLAAGPDHPIALAVPEGEYLKGLLCQV 395
           CS  I  E F+  I  ++L A  + R I  +    PDH I +A  + EYLK L   V
Sbjct: 322 CSHHIDRESFKHTIVSSSLRAKKEIRQIGSYRTQAPDHIITMANKDLEYLKCLFFNV 378