Pairwise Alignments

Query, 299 a.a., periplasmic component of amino acid ABC-type transporter/signal transduction system from Dechlorosoma suillum PS

Subject, 342 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 83.2 bits (204), Expect = 8e-21
 Identities = 76/265 (28%), Positives = 114/265 (43%), Gaps = 8/265 (3%)

Query: 3   KTLTLAAAAVIGSALCAAPVLAQESPTLKKIKDTGSITLGHRESSIPFSYYDDKQQVIGY 62
           K   LA+     SA+ +    A ES TL K+   G IT G       FS  + K +  G 
Sbjct: 4   KLTVLASVVAASSAMLSLSASAAES-TLDKVLSQGFITCGVSTGLPGFSNPNAKGEWEGI 62

Query: 63  SHEMMLKAVDAIKAELKLAKLDVKLMPVTSANRITLLQNGTVDMECGSTTNNLERQKQVG 122
             E       A+  +    K  VK +P+T+  R T LQ+G +D+   +TT  L+R   +G
Sbjct: 63  DVEYCQAMAAAVLGD----KTKVKFVPLTAKERFTALQSGEIDVLSRNTTWTLQRDSALG 118

Query: 123 --FSTSIFVIGTRLMAKKDAGVKDFPDLAGKNVVTTAGTTSERLIRKMNEEKQMKMNIIS 180
             F    +  G   M KKD GVK   +L G +V   +GTT+E  +        M    + 
Sbjct: 119 LNFVGVNYYDGQGFMVKKDLGVKSAKELNGASVCVQSGTTTELNLADYFRNSGMTYKPVV 178

Query: 181 AKDHGESFLTLESGRAVAFMMDDALLYGEMAKAKRPGDWVVVGTAQSKEAYGCMLRKDDA 240
                ++    ++GR      D + LY      ++P   VV+    SKE  G ++R+DD 
Sbjct: 179 FDTAAQTSKGFDAGRCDVLTTDQSGLYALRLNLEKPDSAVVLPEIISKEPLGPVVRQDDD 238

Query: 241 GFKKVVDAALTKAMTSGEAEKIYNK 265
            +  V    L  AM + E   I +K
Sbjct: 239 KWFNVAKWVL-YAMVNAEEYGITSK 262