Pairwise Alignments

Query, 434 a.a., ABC-type branched-chain amino acid transport system, periplasmic component from Dechlorosoma suillum PS

Subject, 387 a.a., ABC transporter substrate-binding protein from Burkholderia phytofirmans PsJN

 Score =  263 bits (673), Expect = 5e-75
 Identities = 144/343 (41%), Positives = 202/343 (58%), Gaps = 3/343 (0%)

Query: 46  VKIGHASPLTGPQAHIGKDNEYGATLAIEELNAKGLEIGGAKVKFELISDDDQADPKQGT 105
           V+IG A+PLTGP A  GK+ +  A LAIE+ NA+  +IG   V FEL   DDQADP+  +
Sbjct: 35  VRIGFAAPLTGPSAADGKEMKNAARLAIEDANARHPKIGERTVSFELAPLDDQADPRVAS 94

Query: 106 TVAQKFVDAKVNGVIGHLNSGTTIPASKIYFDAGIPQISGSATNPTYTKQGFATAFRVMA 165
            VAQ+FVD  V GV+GH NSG +I AS +Y DA I Q+S S+T+  YT +G  ++FRV+ 
Sbjct: 95  QVAQRFVDMSVAGVVGHFNSGCSIAASNVYDDAQIAQVSPSSTSAIYTLRGKKSSFRVVG 154

Query: 166 NDEQQGKALAQFAAKTLAAKSVAIIDDRTAYGQGLADEFKKAAEAAGLKVVASEYTNDKA 225
            D   G  L ++  +   A+ VAI+DDRT +G GLAD          + +VA EY  DK 
Sbjct: 155 QDAVAGAELGRYLVEDFQARRVAIVDDRTDFGAGLADRVSDFIAQRHVAIVAREYVTDKT 214

Query: 226 TDFKAILTKIKSKKPDLIFYGGMDPQGGPMAKQMKELGLKAKFLTGDGGCTPNFITLAGA 285
            DF AILT+I+S+  DL+ +GG D Q   + ++M+  G+KA  L G+G     F+ LA  
Sbjct: 215 VDFSAILTRIRSQNADLVVFGGFDAQAAQIVRRMRSAGMKAT-LAGEGFNNAIFLNLARG 273

Query: 286 AAEGQYCSLPGVPLDKMPGGTVFKDKFVGKFKTEIQ-LYAPYVYDATMVLVDAMKRANSV 344
             EG     PG+PL++MP    F  ++  ++K +++   APY YDAT V+V A+  A S 
Sbjct: 274 DGEGTVTIQPGLPLNRMPAKD-FASRYEARYKAKLEGFQAPYAYDATSVIVQAVLAAQSA 332

Query: 345 EPAKYLPEIGKTSFQGVTAKIGFDEFGDLKDGAISFYEYKGGK 387
                L  + KT+  G+T  I FD+ GDL     + Y   GG+
Sbjct: 333 RAVDVLQAVRKTNMDGLTGPIAFDKNGDLAAAPYTIYRLTGGR 375