Pairwise Alignments

Query, 482 a.a., tetratricopeptide repeat protein from Dechlorosoma suillum PS

Subject, 389 a.a., TPR repeat (NCBI) from Rhodospirillum rubrum S1H

 Score =  195 bits (495), Expect = 3e-54
 Identities = 157/412 (38%), Positives = 192/412 (46%), Gaps = 50/412 (12%)

Query: 62  GAWAEAEAAYRRALAEDPGLGPVWLNLGGLLLSRGRAEEALPVCLQTLSLLPGAAAAWVN 121
           GA  E  AA  R LAED                 GR +EA       L+  PG      N
Sbjct: 6   GAEVEDLAARGRRLAED-----------------GRLDEAREAFAAALAAAPGRVDLLTN 48

Query: 122 LGAACICLEDFAQGERCLLKALSLEPDRPSAHIN--LAYLLLRQGR-----YEAGWECFE 174
           LGA  + L + AQ      +AL+  P    A  N  LA LL    R     Y A W  F 
Sbjct: 49  LGAIALRLGEPAQAIDLFDRALAQTPSDADARYNRGLARLLAGDRRGGFEDYRARWRAFG 108

Query: 175 ARPWYRELAAHAHCPRWHGEAPAGRHLLVLCEAGHGDMIQFCRYLPLLRARGARLSLVCQ 234
             P Y  L      P W G A     LL+  E G GD + F RY P   ARG ++ L CQ
Sbjct: 109 LTPPYDAL------PPWDGAADGPGPLLLHTEQGLGDALHFVRYCPDAAARGLKVVLACQ 162

Query: 235 PALVRLFAALPGVERVIPLA--DLPAARGDWDAWVPLMSLPRHFATRVDSIPAALPYLQV 292
           PAL  L A  PG++R+IPL     P AR      + LM LP      +      +PYL  
Sbjct: 163 PALGALLAGAPGIDRLIPLGAPPPPGARA-----LALMDLPG--LLELGEEGHRVPYLGA 215

Query: 293 GAPERQAWRLRLPAAG---LRVGLAWRGNPRFENDGERSL-PGLWTLAPLAAVPGIALVS 348
                 AW  RL A     +R+G+AWRG+P    D ERS  P L+   PLAA+PG+ L++
Sbjct: 216 EGRRVDAWAARLAAIAPRDMRIGVAWRGSPTHGLDRERSFSPALF--GPLAALPGVRLIA 273

Query: 349 LQKGEAEEEALWTPAGMRIAALGSELTD-FADTAALIANLDLVIAVDTAVAHLAAALGVA 407
           L       EA   PA +          D F  TAA++  LDLVI VDT  AHLA ALG  
Sbjct: 274 LHPDATPAEA--GPAILCPEPDADWRRDAFLGTAAMMGALDLVITVDTVFAHLAGALGRP 331

Query: 408 CWLLLPRYKTDWRWLEGRQDSPWYPGVMRLFRQERRGDWDEVVSRVAGELAA 459
            W+LLPR   DWRW    + +PWYP  +RL RQ+  GDW  VV+  A  LA+
Sbjct: 332 AWVLLPRV-PDWRWGLSGETTPWYP-TLRLLRQKEAGDWPGVVAEAARRLAS 381



 Score = 32.0 bits (71), Expect = 4e-05
 Identities = 25/81 (30%), Positives = 33/81 (40%)

Query: 9  SAAARAERRYHQGIACLEAGQGEEAEAHLRQALALAPQLTRARANLGYVLEERGAWAEAE 68
          +  A  E    +G    E G+ +EA      ALA AP       NLG +    G  A+A 
Sbjct: 4  AVGAEVEDLAARGRRLAEDGRLDEAREAFAAALAAAPGRVDLLTNLGAIALRLGEPAQAI 63

Query: 69 AAYRRALAEDPGLGPVWLNLG 89
            + RALA+ P       N G
Sbjct: 64 DLFDRALAQTPSDADARYNRG 84