Pairwise Alignments

Query, 360 a.a., Holliday junction DNA helicase, RuvB subunit from Dechlorosoma suillum PS

Subject, 449 a.a., replication-associated recombination protein A from Vibrio cholerae E7946 ATCC 55056

 Score = 50.8 bits (120), Expect = 7e-11
 Identities = 71/262 (27%), Positives = 104/262 (39%), Gaps = 53/262 (20%)

Query: 35  LRPKRLADYVGQAKIREQLSIFIHAAKRRSEALDHV---LLFGPPGLGKTTLAHIVA--- 88
           +RP+ +  Y+GQ  I     +      RR+    H+   +L+GPPG GKTTLA + A   
Sbjct: 21  MRPQTVEQYIGQQHI-----LGPGKPLRRALEAGHIHSMILWGPPGTGKTTLAEVAANYA 75

Query: 89  -AEMGVNLRQTSGPVLERAGDLAAILTNLE-PHDVLFIDEIHRLSPVVEEILYPALEDFQ 146
            AE+      TSG    RA    A    L     +LF+DE+HR +   ++   P +ED  
Sbjct: 76  NAEVERVSAVTSGVKEIRAAIEKARENKLSGRRTILFVDEVHRFNKSQQDAFLPHIEDGT 135

Query: 147 IDIMIGEGPAARSVKLDLPPFTLVGATTR--AGMLTNPLRDRFGIVARLEFYNAQELTHI 204
           +                    T +GATT   +  L N L  R   V +L   N QE+   
Sbjct: 136 V--------------------TFIGATTENPSFELNNALLSR-ARVYKLTSLNQQEILQA 174

Query: 205 VTRSAQLLNVAIEPEGALEIARRSRGTPRIANRLLRRVRD-YAE-VKADGIITREVADAA 262
           + ++               IA   RG  ++A      V D  AE V  D  ++    +  
Sbjct: 175 LHQA---------------IADTERGLGKVAAVFADNVLDRLAELVNGDARMSLNYLELL 219

Query: 263 LSMLDVDHGGLDLMDRKLLSAV 284
             M   D  G   +D  LL+ V
Sbjct: 220 YDMAREDDQGRKQIDLPLLAEV 241