Pairwise Alignments

Query, 160 a.a., hypothetical protein from Dechlorosoma suillum PS

Subject, 156 a.a., 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH from Vibrio cholerae E7946 ATCC 55056

 Score =  139 bits (349), Expect = 3e-38
 Identities = 75/160 (46%), Positives = 100/160 (62%), Gaps = 5/160 (3%)

Query: 1   MKLCIIAVGHRMPDWVAEGCAEYIKRMPREMAVSVVEIKPEPRGSKTR-EQLLSAEKARI 59
           MK+ +IAVG +MP WV EG  EY +R P +M + +VEI    RG      ++L  E   +
Sbjct: 1   MKIQLIAVGTKMPKWVEEGFQEYRRRFPHDMPLELVEITAGKRGKNADIARILQKEGEAM 60

Query: 60  RAALPGGCRIVALDERGEDLSTVKLAARLEGWMGEGRDIALLIGGADGLDPELKAEAQQN 119
            AA+P G RIV LD  G+   T +LA +LE W  +GRD+++LIGG +GL P  KA A Q+
Sbjct: 61  LAAVPKGNRIVTLDIPGKRWDTEELAVQLESWKLDGRDVSILIGGPEGLAPACKAAADQS 120

Query: 120 GGAMLRLSSLTLPHAMARLILCEQLYRAVSVIRNHPYHRE 159
                 LS LTLPH + R+++ E LYRA S+  NHPYHRE
Sbjct: 121 WS----LSPLTLPHPLVRVVMAESLYRAWSITTNHPYHRE 156