Pairwise Alignments

Query, 352 a.a., putative permease from Dechlorosoma suillum PS

Subject, 361 a.a., AI-2E family transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  154 bits (390), Expect = 3e-42
 Identities = 104/339 (30%), Positives = 178/339 (52%), Gaps = 20/339 (5%)

Query: 6   SDRILGFAALGFLIVGCFLVLRPFLSAVLWAAILATTVWPVFHWVDQRLPGWRNTSALLT 65
           S R+L  A L   +  C+ ++ P++++++ A I++  ++P+  W +++LP   N +A L+
Sbjct: 10  SHRVLVVALLASALA-CYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAAFLS 68

Query: 66  TLATALVLVAPFIVV---AVGLGSNVAELAAATRTLLEGGLPDAPQWLQDIPFV--GERL 120
            +   +++V P + +    V  GS  ++   A  T  +GG+    Q L + P+V  G  L
Sbjct: 69  CVVLTVIIVIPLLFIFGAIVQQGSKFSQNLYAWVT--QGGI----QALFNHPWVVKGLSL 122

Query: 121 HAYWQGFAH-NGQRLVAELGQLVEP-AKGLVLNGSRAIGMG---VFHLMLSVLIVFFLFR 175
             ++  F   + Q++   +GQ        LV   ++ +G     V H  L + ++FFL R
Sbjct: 123 ANHYLPFEEISPQQIAQRIGQFATTFGSNLVSISAKILGDATSFVMHFFLMLFVLFFLLR 182

Query: 176 DGEAVTAHLTAVLERLAGARGRRLLHLAHGTVGGVVYGIIGTALAQGVLAGIGFAVAGVP 235
           D + + + +  +L  L+ ++  RLL          V G   TA+AQGV  GIG  +AG P
Sbjct: 183 DHDKIISAIRHILP-LSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGMWLAGFP 241

Query: 236 GALLLGLATFFLSAVPV-GPPLIWGPAAFWLFQQGELGWAIFVAAWGFFVVSTVDNVLKP 294
           G L  G    F S +PV G  LIW PA  +LF  G+  WAIF+A W   VV ++DN+L+P
Sbjct: 242 G-LFWGTMMGFASFIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSVAVVGSIDNLLRP 300

Query: 295 LIISRGASLPFILVLLGVLGGVLAFGFIGVFLGPTLLAV 333
            ++   A +  +++   +LGG+  FG IG+  GP + A+
Sbjct: 301 FLMQGSAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAI 339