Pairwise Alignments

Query, 384 a.a., RND family efflux transporter, MFP subunit from Dechlorosoma suillum PS

Subject, 367 a.a., Efflux transporter, RND family, MFP subunit from Pseudomonas fluorescens FW300-N2E2

 Score =  204 bits (519), Expect = 3e-57
 Identities = 125/341 (36%), Positives = 189/341 (55%), Gaps = 3/341 (0%)

Query: 15  MVLASCGKEAP-KAPEPRPALTQVVGAAGQSDMLWVGEVRARYETDQGFRIGGKVVERKV 73
           ++LA CG E P +   PR  + Q V +   + +   G+V+AR + D  FR+GGK++ERKV
Sbjct: 16  VLLAGCGDEKPVEKALPRVFVQQAVPSEYAASVTLTGDVQARVQADLSFRVGGKIIERKV 75

Query: 74  DIGAVVKKGQILARLDPVDAGLSAAAANAQTKAAEADFLVAKAEYERQKKLLEKQFISQS 133
           D+GA V   Q+LARLDP D   +  +A AQ  A +A    + A + RQ+KLL K + SQS
Sbjct: 76  DVGARVSARQVLARLDPRDLQTNVDSAAAQVAAEQARVKQSAAAFVRQQKLLPKGYTSQS 135

Query: 134 AFDSREAQFKAALARLDQARAQAAVTGNQAGYTDLVAEKDGVVTDVKVEPGQVVSAGQPA 193
            +D+ +AQ +++ + L  A+AQ A    Q  YT L+AE  G++T  + E GQVV A +P 
Sbjct: 136 EYDAAQAQLRSSQSALTAAQAQLANAREQLSYTALIAEAPGIITARQAEVGQVVQATEPI 195

Query: 194 IRLALAGDKEVVVAVPEGRMKGIEPGTSAVIRLWANQDQSYAARVREVAPAADAATRSFQ 253
             LA  G+++ V  + E  +       + +I L  N        VRE+ PA  A T + Q
Sbjct: 196 FSLARDGERDAVFNIYESLLSEPPSDPAIIISLLDNPAIKTTGTVREITPAVSAQTGTVQ 255

Query: 254 VKVTVLEPDAGLRLGMTAGVLIGSA-EAPLLVPTAALTRQDGKNTVWVVNPQSGEVQPRS 312
           VKVT+ +   G+RLG        +A +    +P +ALT+   +  VW+V+ + G+ Q ++
Sbjct: 256 VKVTLDDLPEGMRLGSVVSATAKAAGKTAFELPWSALTKNLSEPAVWLVDSE-GKAQLQT 314

Query: 313 VTTGPFREDGVVVEKGLARGERVVIAGVHKLQPGQLVRAVE 353
           VT G +    V+V  GL  GE+++IAG   L PG  V   E
Sbjct: 315 VTVGRYLTGKVIVSDGLKGGEKIIIAGGQLLHPGVRVEIAE 355