Pairwise Alignments

Query, 620 a.a., putative nucleoside-diphosphate sugar epimerase from Dechlorosoma suillum PS

Subject, 621 a.a., polysaccharide biosynthesis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  406 bits (1043), Expect = e-117
 Identities = 259/622 (41%), Positives = 364/622 (58%), Gaps = 38/622 (6%)

Query: 20  RRFIASAYDLVALIVCWLAAYWLR-----FNLSLPDEYLRAGLFSLAILVPVYVPLFWLS 74
           +R I   YD+ AL+    AA  LR     F  S P+        S+   V V +  F   
Sbjct: 16  KRMITLLYDVFALMFSLYAAIALRLDTLAFTFSFPE------FLSMMTTVGVTLYCFVRL 69

Query: 75  GLYRGIWRYASLMDLRRIIVSVGLGGLVTAVAVFMTGMPGVPRSVLVLHPILLILAMGGG 134
           G+YR + RY  L  +  I +SV +  +  A++ F      +PRSV  ++  L  L +GG 
Sbjct: 70  GMYRAVLRYMMLPAIGYIFLSVIISAVTLALSGFFF-QAFIPRSVPFIYAGLATLTLGGP 128

Query: 135 RFLYRAWKDRCLYGHLALSGESVLILGAGEVGERLIRELQRSPQWRVAGLLDNDPAKHGR 194
           R   R       Y +      +V I GAG  G  L   L +  ++     LD+DPAK G+
Sbjct: 129 RIFIRT----IYYHYYKRQKPNVFIYGAGSTGRDLAYALIQGDEYHPVIFLDDDPAKTGQ 184

Query: 195 EVHGVKIR--GDIASMVHWAKELEVGHVIVAMPSVSAAVRRGAMEQAVQAGLKVLTVPAL 252
            + G+++    D  S+ +  + +++   ++A+ ++    R   +E+     +++ +VP++
Sbjct: 185 IIFGLRVHHSSDFESLRNLYEPVKM---LIAINNIGKNTRIKLLERLSHWPIEIQSVPSV 241

Query: 253 DDLLSGRVSLSQIRQVELEDILGREPVQLDDAGLSRLIAERTILVTGAGGSIGSELARQI 312
           +D+ +GR   + ++ +++ D+LGR PV+ D A L + I E++++VTGAGGSIGSEL RQI
Sbjct: 242 EDIAAGRAKATDVQDLDIADLLGRAPVEPDLALLQKNITEKSVMVTGAGGSIGSELCRQI 301

Query: 313 ARFAPRQLVLFEVSEFALYQIEQEFRRTFPGLD----VVCVVGDVKDEARLQQVFAAYRP 368
               P+ LVLFE++E+ LY I+QE +     L     +V  +G V+ E R++++  A++ 
Sbjct: 302 LAQKPKTLVLFELNEYNLYTIDQELQAIKQNLKLNTKIVAALGSVQRENRVKKLMQAHQV 361

Query: 369 ALVFHAAAYKHVPLMESANAWEAVRNNVLGTWRVAMAARQAGVEKMVLISTDKAVNPTNV 428
             V+HAAAYKHVPL+E  N  E +RNNV GT   A AA +AGV+   LISTDKAV PTN+
Sbjct: 362 ETVYHAAAYKHVPLVED-NVIEGIRNNVFGTLACANAAIEAGVKNFTLISTDKAVRPTNI 420

Query: 429 MGTTKRMAERVVQSLEQAGGGTQFIVVRFGNVLGSNGSVIPTFREQIARGGPVTVTHPDI 488
           MG +KRMAE V+Q+L      T F +VRFGNVLGS+GSV+P F++QI  GGPVTVTHPDI
Sbjct: 421 MGASKRMAELVLQALADKNSTTIFTMVRFGNVLGSSGSVVPLFKKQIRAGGPVTVTHPDI 480

Query: 489 IRYFMLIPEAAQLVLQAGLMGNGGEIFVLDMGEPVKIVDLARDLIRLSGF--------TE 540
           IRYFMLIPEAAQLV+QAG M + G++FVLDMGEPVKIVDLA+ +I L G          E
Sbjct: 481 IRYFMLIPEAAQLVIQAGAMSHNGQVFVLDMGEPVKIVDLAKRMIHLMGMKEFCDGRSDE 540

Query: 541 EEIPIEFTGLRPGEKLYEELLADNEMTLPTPHAKLRVAKAESAPEEAWIGDLARWLET-- 598
            +I I+FTGLRPGEKLYEELL   E    T H K+  A  E    +A + DL   L+   
Sbjct: 541 GDIEIKFTGLRPGEKLYEELLI-GENVEGTSHQKIMTACEEKLSWDA-MEDLLTELDVCC 598

Query: 599 PPADVAGIKAGLARFVPEYRPQ 620
              DV  IK  L      Y PQ
Sbjct: 599 HNFDVECIKRILLDAPTGYSPQ 620