Pairwise Alignments

Query, 443 a.a., DNA/RNA helicase, superfamily II from Dechlorosoma suillum PS

Subject, 433 a.a., ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  361 bits (927), Expect = e-104
 Identities = 189/380 (49%), Positives = 249/380 (65%)

Query: 1   MTFADLDLVPPLLEALDVLGYQTPTPVQEKAIPAVLAGGDLMAAAQTGTGKTASFALPLL 60
           M F      P +L A+   GYQ  TP+Q++AIPA+  G D++A+AQTGTGKTA+FALP+L
Sbjct: 1   MRFESFSFCPEILRAISDCGYQKMTPIQQQAIPAIRRGQDVLASAQTGTGKTAAFALPIL 60

Query: 61  QRLAHDPEPTASNSTRALILVPTRELAQQVCDSFVAYGQFLVLRSYAVYGGVSINPQMMK 120
           Q++  +P  T  ++TR LIL PTRELA QV ++  AY ++L      +YGGV +  Q  K
Sbjct: 61  QKMVENPSETLKSNTRVLILTPTRELAAQVAENVEAYSKYLNFSVLTIYGGVKVETQAQK 120

Query: 121 LRKGVDILVATPGRLLDLHRQNAVRFDQVRTLVLDEADRMLDLGFARELNALFALLPKQR 180
           L++G DI+VATPGRLL+      +    V  LVLDEADRMLD+GF+ ++  +   + K+R
Sbjct: 121 LKRGADIIVATPGRLLEHLTACNLSLSSVDFLVLDEADRMLDMGFSADIQKILQAVNKKR 180

Query: 181 QTLLFSATFSDAIRSMADQLLKKPLSIETARPNATARGIKQWVVPVDKKRKSALFCHLYK 240
           Q LLFSATFS A++ +A++++ KP  I   + N TA  + Q V PV+++RK  L   L  
Sbjct: 181 QNLLFSATFSSAVKKLANEMMIKPQVISADKQNTTADTVSQVVYPVEQRRKRELLSELIG 240

Query: 241 HKKWDQVLVFVKTRKGVDELVETLTAKGIAAESIHGDKPQPARLRALESFKAGQVRVLVA 300
            K W QVLVF  TR   D LV+ L   GI +E +HG+K Q +R RAL  F +G+VRVLVA
Sbjct: 241 KKNWQQVLVFTATRDAADTLVKELNLDGIPSEVVHGEKAQGSRRRALREFVSGKVRVLVA 300

Query: 301 TDVASRGLDIDDLPRVVNFDLPIVPEDYVHRIGRTARAGASGEAVSLVCADEVNLLGAIE 360
           T+VA+RGLDI  L  VVNFDLP + EDYVHRIGRT RAG SG A+S V  +E   L  IE
Sbjct: 301 TEVAARGLDIPSLEYVVNFDLPFLAEDYVHRIGRTGRAGKSGVAISFVSREEERTLADIE 360

Query: 361 VLIGQPLSRIEQHGFEPDHR 380
            LIGQ + RI   G+E   R
Sbjct: 361 KLIGQKIRRITVPGYEVGSR 380