Pairwise Alignments

Query, 501 a.a., UDP-N-acetylmuramyl-tripeptide synthetase from Dechlorosoma suillum PS

Subject, 487 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase (RefSeq) from Shewanella amazonensis SB2B

 Score =  328 bits (842), Expect = 2e-94
 Identities = 209/473 (44%), Positives = 269/473 (56%), Gaps = 19/473 (4%)

Query: 27  DSRRVQPGDVFVAYPGHAADGRSFIPAALEKGAAGVFWEARDFAWNPAWAAVPQLGVD-- 84
           DSR++  G +F+A PG+  DGR+++ AA  KGAA       D   +   +  P L +   
Sbjct: 26  DSRQLTAGGLFIAVPGYKTDGRAYLDAAFAKGAAAALVHTDDPDEHGKVSYEPGLCIAFF 85

Query: 85  NLQSFAGHLANLVYGRPSEQLALVGVTGTNGKTTCSQWIAQALGGAGRSCAVIGTLGNGF 144
            L      +A   Y     +L +VGVTGTNGKT+ SQ IAQ     G   AV+GTLGNG 
Sbjct: 86  QLNRQVSAVARQYYALTRGKLRVVGVTGTNGKTSVSQLIAQLTELLGDKAAVMGTLGNGL 145

Query: 145 PDALGEAANTTPDALALHRLLAEYKAAGAVACAMEVSSIGLDQGRCHGARFSVAVFTNLT 204
              L +  NTT DA+ +   L +++  GA  CAMEVSS GL QGR     F VAVFTNL+
Sbjct: 146 WGQLQDVGNTTADAVRVMADLYDFEHQGAKVCAMEVSSHGLVQGRVEAVPFEVAVFTNLS 205

Query: 205 RDHLDYHGTMAAYGAAKERLFAWPELNEAVINLDDPFGRELLAQTTASLRIGYTLEGRQA 264
           RDHLDYHG M  Y AAK RLFA+  L+  VINLDD  G +           G++  G   
Sbjct: 206 RDHLDYHGDMDNYAAAKRRLFAFGSLSARVINLDDKVGEQWF--DGMGCATGFSCLGH-- 261

Query: 265 TEADWLLSAENLRHGAEGLAFTLIAPQGRVVVETGLVGRYNVANLLAVAGALLALGLPLE 324
            +ADW     +  H   G +  L+ P G+  +E  L+G +N++NLLA   A+  LG  + 
Sbjct: 262 AKADWRFENAHFHHA--GFSANLVWPGGQKPLECRLLGAFNLSNLLAALCAMAQLGYQVP 319

Query: 325 TVGQRLCRLTPPAGRMQRFGGKGLPLVVVDYAHSPDALENALTALREVTQARGGRLHCVF 384
            +     +L    GRM+ F  K    +VVDYAH+PDA+E AL A R   +   G L  VF
Sbjct: 320 DLVAAAAKLEAVPGRMECFPRKDGVSLVVDYAHTPDAIEQALKAARHHCE---GALWIVF 376

Query: 385 GCGGDRDKGKRPLMGSVAARLADEVLLTSDNPRSEDPLAILAEIRAG--APEAAL-EAER 441
           GCGGDRDKGKRPLM   A   AD ++LTSDN RSEDP  IL +++AG  APE AL   +R
Sbjct: 377 GCGGDRDKGKRPLMAEAAEAFADCLVLTSDNARSEDPAVILEDMKAGLDAPERALCMVDR 436

Query: 442 EVAVAHAVLRADVADVVLVAGKGHEPYQEIMGAAGLVRRPYSDIEAVARALQQ 494
             A+ HAV  A   D++L+AGKGHE YQEI G    V+  Y D  A+AR L +
Sbjct: 437 VAAIRHAVSMAKPGDLILLAGKGHETYQEIAG----VKHEY-DERALARVLSE 484