Pairwise Alignments

Query, 501 a.a., UDP-N-acetylmuramyl-tripeptide synthetase from Dechlorosoma suillum PS

Subject, 494 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase MurE from Phaeobacter inhibens DSM 17395

 Score =  244 bits (624), Expect = 4e-69
 Identities = 176/474 (37%), Positives = 234/474 (49%), Gaps = 25/474 (5%)

Query: 27  DSRRVQPGDVFVAYPGHAADGRSFIPAALEKGAAGVFWEARD---FAWNPAWAAVPQLGV 83
           DSR+V  G +F A PG    G  F PAAL  GAA +  +A      A     + V  + V
Sbjct: 30  DSRKVVEGGLFAALPGSQVHGAKFTPAALGNGAAAILTDAAGAQIVAQLLRESTVALVVV 89

Query: 84  DNLQSFAGHLANLVYGRPSEQLALVGVTGTNGKTTCSQWIAQALGGAGRSCAVIGTLG-- 141
           ++ +    + A L +G   E   +V VTGTNGKT+ + ++ Q     G     +GT G  
Sbjct: 90  EDPRQALAYAAALWFGAQPE--TMVAVTGTNGKTSVASFVRQIWVELGHQAVNLGTTGVE 147

Query: 142 NGFPDALGEAANTTPDALALHRLLAEYKAAGAVACAMEVSSIGLDQGRCHGARFSVAVFT 201
             +   L    +TTP+ + LH  LA+  AAG    AME SS GL+Q R  G   + A FT
Sbjct: 148 GSWSHPLN---HTTPEPVTLHDALAQAAAAGVTHAAMEASSHGLEQRRLDGVHLAAAGFT 204

Query: 202 NLTRDHLDYHGTMAAYGAAKERLF--AWPELNEAVINLDDPFGRELLAQTTASLRIGYTL 259
           N T+DHLDYH T  AY  AK  LF    P+   AVIN+DDP G ++ A   A    G+ +
Sbjct: 205 NFTQDHLDYHETFEAYFTAKAGLFRRVLPDDGVAVINMDDPRGEQMRAVAAAR---GHEV 261

Query: 260 EGRQATEADWLLSAENLRHGAEGLAFTLIAPQGRVVVETGLVGRYNVANLLAVAGALLAL 319
                   D  LS    R+ A G                 L+G +   N+L   G ++A 
Sbjct: 262 ISVGRGLGD--LSLVGARYDASGQDMRFTWHDKPYQARLNLIGGFQAENILLACGLVIAS 319

Query: 320 GLPLETVGQRLCRLTPPAGRMQRFGGK-GLPLVVVDYAHSPDALENALTALREVTQARGG 378
           G   + V   L  L    GRMQ    +     V VDYAH+PDA+  A+ ALR       G
Sbjct: 320 GEDPQAVFDTLPHLQTVRGRMQLAATRENGATVFVDYAHTPDAVATAIKALRPHVL---G 376

Query: 379 RLHCVFGCGGDRDKGKRPLMGSVAARLADEVLLTSDNPRSEDPLAILAEIRAGAPEAALE 438
           RL  + G GGDRD  KRPLMG  A   AD V++T DNPRSEDP  I A ++ GAP+A   
Sbjct: 377 RLVAIVGAGGDRDAAKRPLMGQAAQNNADLVIVTDDNPRSEDPAVIRAAVKGGAPDAMEV 436

Query: 439 AEREVAVAHAVLRADVADVVLVAGKGHEPYQEIMGAAGLVRRPYSDIEAVARAL 492
            +R  A+   V      D +L+ GKGHE  Q I+G+  L   P+ D+E  + A+
Sbjct: 437 GDRAEAILRGVDALGAGDALLICGKGHETGQ-IVGSDVL---PFDDVEQASMAV 486