Pairwise Alignments

Query, 501 a.a., UDP-N-acetylmuramyl-tripeptide synthetase from Dechlorosoma suillum PS

Subject, 488 a.a., UDP-N-acetylmuramyl-tripeptide synthetase (RefSeq) from Shewanella loihica PV-4

 Score =  365 bits (938), Expect = e-105
 Identities = 204/463 (44%), Positives = 288/463 (62%), Gaps = 12/463 (2%)

Query: 16  AQGAAVTRLENDSRRVQPGDVFVAYPGHAADGRSFIPAALEKGAAGVFWEARDFAWNPAW 75
           A G +++ L  DSR +  G VFVA PGH  DGR ++  AL +GA        D A +   
Sbjct: 14  AGGESLSHLTLDSREIGQGSVFVAVPGHRVDGRDYVDTALSQGAVAALIHTDDPAEHGKV 73

Query: 76  AAVPQLGVD--NLQSFAGHLANLVYGRPSEQLALVGVTGTNGKTTCSQWIAQALGGAGRS 133
           +    L +    LQ     LA+ +Y    +++ L+GVTGTNGKT+ +Q IAQ   G G+ 
Sbjct: 74  SQDNGLRIYFFQLQRQLSALASQLYVLGRDRIKLIGVTGTNGKTSVTQLIAQLSDGLGKP 133

Query: 134 CAVIGTLGNGFPDALGEAANTTPDALALHRLLAEYKAAGAVACAMEVSSIGLDQGRCHGA 193
            AV+GTLGNG    L ++ NTT D + + R L ++   G   CAMEVSS GL QGR    
Sbjct: 134 AAVMGTLGNGLWGQLVDSGNTTADPITVMRQLEDFDRQGTAVCAMEVSSHGLVQGRVDAV 193

Query: 194 RFSVAVFTNLTRDHLDYHGTMAAYGAAKERLFAWPELNEAVINLDDPFGRELLAQTTASL 253
            F VAVFTNL+RDHLDYHG+M AYGAAK+RLF +  L+  +INLDDP GR+ +       
Sbjct: 194 PFDVAVFTNLSRDHLDYHGSMDAYGAAKQRLFRFSSLSHGLINLDDPVGRQWIQDKRCKG 253

Query: 254 RIGYTLEGRQATEADWLLSAENLRHGAEGLAFTLIAPQGRVVVETGLVGRYNVANLLAVA 313
            +G++++G++       +  + ++  ++G++ TL+ P+G   +++ L+G +N++NL+A  
Sbjct: 254 LVGFSIQGQEGA----AIYTKEVKQHSQGVSATLVWPEGEAKIDSPLLGIFNLSNLVAAL 309

Query: 314 GALLALGLPLETVGQRLCRLTPPAGRMQRFGGKGLPLVVVDYAHSPDALENALTALREVT 373
           GAL   G  +  +  ++  L P AGRM+RF  +    +VVDYAH+PDA+E AL ALR   
Sbjct: 310 GALYLSGYAMAQLLTQVSSLKPVAGRMERFTTQEGVTLVVDYAHTPDAIEQALRALRGHC 369

Query: 374 QARGGRLHCVFGCGGDRDKGKRPLMGSVAARLADEVLLTSDNPRSEDPLAILAEIRAG-- 431
           +   G+L CVFGCGGDRDKGKRPLM   A   AD V++TSDN RSEDP+AI+ ++ AG  
Sbjct: 370 R---GKLWCVFGCGGDRDKGKRPLMARAAEENADCVMVTSDNARSEDPMAIIQDVLAGLN 426

Query: 432 APEAAL-EAEREVAVAHAVLRADVADVVLVAGKGHEPYQEIMG 473
            P+ AL + +R+ A+   V  A   D++L+AGKGHE YQEI G
Sbjct: 427 KPQIALTQVDRQQAIREVVTLASNGDLILLAGKGHETYQEIAG 469