Pairwise Alignments

Query, 501 a.a., UDP-N-acetylmuramyl-tripeptide synthetase from Dechlorosoma suillum PS

Subject, 493 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase (RefSeq) from Shewanella sp. ANA-3

 Score =  343 bits (881), Expect = 6e-99
 Identities = 212/483 (43%), Positives = 278/483 (57%), Gaps = 29/483 (6%)

Query: 27  DSRRVQPGDVFVAYPGHAADGRSFIPAALEKGAAGVFWEARDFAWNPAWAAVPQLGVDNL 86
           DSR ++ GDVF+A PGH  DGR FI  AL +GA  V              A  Q     +
Sbjct: 26  DSRAIRRGDVFLALPGHKVDGRQFIDKALAQGATAVLVHTDKIDEQGKVIATEQ----GV 81

Query: 87  QSFAGHLANLVYGRPS--------EQLALVGVTGTNGKTTCSQWIAQALGGAGRSCAVIG 138
           Q +   LA  V    +        + + +VG+TGTNGKT+ SQ  AQ +       AV+G
Sbjct: 82  QIYFYQLARQVSAVAAVRYPVVQGQSMGIVGITGTNGKTSTSQLCAQLVTLLEGKAAVMG 141

Query: 139 TLGNGFPDALGEAANTTPDALALHRLLAEYKAAGAVACAMEVSSIGLDQGRCHGARFSVA 198
           TLGNG    L ++ NTT DA+ L R L E+   G   CAMEVSS GL QGR     F VA
Sbjct: 142 TLGNGLWGELVDSGNTTADAITLMRQLHEFADKGVNTCAMEVSSHGLVQGRVDAVPFDVA 201

Query: 199 VFTNLTRDHLDYHGTMAAYGAAKERLFAWPELNEAVINLDDPFGRELLAQ--TTASLRIG 256
           VFTNLTRDHLDYHG M  Y  AK+ LF +  L   ++NLDDP G   L++     +   G
Sbjct: 202 VFTNLTRDHLDYHGDMENYAEAKQMLFRFDSLLHGLVNLDDPVGAAWLSELANVPAKMWG 261

Query: 257 YTLEGRQATEADWLLSAENLRHGAEGLAFTLIAPQGRVVVETGLVGRYNVANLLAVAGAL 316
           +++E    TE  +    +N +   +G+  TL+ P+G V + + L+G +N++NLLA   AL
Sbjct: 262 FSIEAH--TEVAFY--TKNAQFNDQGVQATLVWPEGEVDIRSPLLGAFNLSNLLAALSAL 317

Query: 317 LALGLPLETVGQRLCRLTPPAGRMQRFGGKGLPLVVVDYAHSPDALENALTALREVTQAR 376
              G+ +  +  ++  L P AGRM+RF       +VVDYAH+PDA+E AL ALR   +  
Sbjct: 318 YLQGMDMRALASKVPYLVPVAGRMERFTTADNITLVVDYAHTPDAIEQALNALR---RHC 374

Query: 377 GGRLHCVFGCGGDRDKGKRPLMGSVAARLADEVLLTSDNPRSEDPLAILAEIRAGA--PE 434
            G L CVFGCGGDRDKGKRPLMG  A + AD +++TSDN RSEDP  I+ +I  G   PE
Sbjct: 375 AGELWCVFGCGGDRDKGKRPLMGQAAEQCADRIMVTSDNARSEDPNQIITDIIQGLTHPE 434

Query: 435 AAL-EAEREVAVAHAVLRADVADVVLVAGKGHEPYQEIMGAAGLVRRPYSDIEAVARALQ 493
            AL E +R  A+ H V +A   DV+L+AGKGHE YQE  G    VR  Y D  A+AR L 
Sbjct: 435 RALTEVDRVAAIKHVVAQAKPGDVILLAGKGHETYQEAAG----VRHDY-DERALARQLS 489

Query: 494 QRA 496
           +++
Sbjct: 490 EQS 492