Pairwise Alignments

Query, 433 a.a., Integrase from Dechlorosoma suillum PS

Subject, 391 a.a., Integrase from Pseudomonas stutzeri RCH2

 Score =  288 bits (738), Expect = 2e-82
 Identities = 153/395 (38%), Positives = 236/395 (59%), Gaps = 7/395 (1%)

Query: 4   PLTDTKVRNAKPAEKPYKLQDGQGLYLDVRPSGAKFWRYRYWITPEKDGIYTIGEYPVVS 63
           PLT  +V++A P +  Y L DG GL+L +R +G K WR+R+ +  ++  I ++G    V+
Sbjct: 2   PLTALQVKSAAPRKSDYGLADGGGLFLWIRAAGGKSWRFRFRLDGKQSHI-SLGTIDKVT 60

Query: 64  LSDARREREWAREQAKQGINPTHAKEAERLRRMGEHANTFEAVAREWIDQNRNHWTEKYL 123
           L+ AR+    AR+   QG +P   ++  R +     ANTF+++A EW       W+  Y 
Sbjct: 61  LAQARQLASDARQLVAQGRHPGLERKVMRAQAAMSRANTFKSLALEWHQHKAPRWSVGYA 120

Query: 124 YQVERFLGNDVFPKIGALPIRMVTSAHLLGIIRTVEERGAKSIAVLIRQWSGQIFRYAVA 183
             V      DVFP++G+LP+  +     L + R +E RGA      +RQ   +++R+A+A
Sbjct: 121 GDVVEAFELDVFPQVGSLPLTDIKPMQWLQVFRRIESRGALEKLRKVRQRCQEVYRFAIA 180

Query: 184 TLRADSDPSAPLRGAIKKDPVRHNPPLSKDEIPVMLNKLQKYGGYRGTVLATKLMLYTFV 243
           T RA+ +P A + GA++    RH P L   EIP ++  +Q   G+    +AT+L++ T V
Sbjct: 181 TGRAEYNPIADIGGALQTPTSRHYPFLPIAEIPALIRSIQACPGHDVVKIATRLLILTGV 240

Query: 244 RTVELRKAEWTEFDLEGGEWRVPADRMKMKKQMKVGESHIVPLSRQALEVLKELKTLSGG 303
           RT ELR   W+EFDL+   W +PA RMKM++      +H+VPLS+QA+ VL+EL+ ++GG
Sbjct: 241 RTAELRGVPWSEFDLDKALWLIPAARMKMRR------AHLVPLSQQAVAVLRELERITGG 294

Query: 304 RKFLFPNLRTPDTCMTATTINKALERMGYAGKFSGHGFRATASTMLHELGWNEKAIERQL 363
               FP    P   M+   IN+ L+R GY G+ +GHGFR T ST LHE G+  + +E QL
Sbjct: 295 YTLAFPGRNDPAKPMSEAAINQLLKRSGYDGRATGHGFRHTMSTTLHEQGYPSEWVETQL 354

Query: 364 AHAERNKVKAAYNHAEYLPERREMMQAWSDWIDEL 398
           AH ++N ++  YNHA+YL  RREM+Q +++ +DEL
Sbjct: 355 AHVDKNSIRGTYNHAQYLEGRREMLQWYANHVDEL 389