Pairwise Alignments

Query, 433 a.a., Integrase from Dechlorosoma suillum PS

Subject, 437 a.a., DUF4102 domain-containing protein from Pseudomonas fluorescens SBW25-INTG

 Score =  286 bits (732), Expect = 9e-82
 Identities = 167/405 (41%), Positives = 237/405 (58%), Gaps = 13/405 (3%)

Query: 5   LTDTKVRNAKPAEKPYKLQDGQGLYLDVRPSGAKFWRYR-YWITPEKDGIYTIGEYPVVS 63
           LTDT ++ AKPA KPY L DG GL L V  +G+K W +R YW   +K    ++G YP VS
Sbjct: 3   LTDTAIKQAKPASKPYTLTDGDGLSLQVPTTGSKRWHFRFYW--HDKQLRISLGTYPDVS 60

Query: 64  LSDARREREWAREQAKQGINPTHAKEAERLRRMGEHANTFEAVAREWIDQNRNHWTEKY- 122
           L +ARR RE AR      I+P   + AER +      NTFEAVA  W +      T+   
Sbjct: 61  LKEARRRREAARALVASNIDPRSHRRAERQKASRAVKNTFEAVADRWHEFRSKKLTKSKK 120

Query: 123 --LYQVERFLGNDVFPKIGALPIRMVTSAHLLGIIRTVEERGAKSIAVLIRQWSGQIFRY 180
               Q  ++L  D+ P +G LPI  ++   +L +IR +E RGA   A  +R W  QIFR+
Sbjct: 121 GSAGQASKYLKKDMLPCLGDLPIADISRGDVLELIRRIERRGALVSARKVRTWLNQIFRF 180

Query: 181 AVATLRADSDPSAPLRGAIKKD-PVRHNPPLSKDEIPVMLNKLQKYGGYRGTVLATKLML 239
           A+A    D +P+A L    +   PVRHNP L  +E+P +L  +  Y G   T L  +L+L
Sbjct: 181 AMAEGLIDVNPAADLDIVAETPRPVRHNPFLQVNELPGLLRTVTHYEGAEKTRLGIRLLL 240

Query: 240 YTFVRTVELRKAEWTEFDLEGGEWRVPAD-----RMKMKKQMKVGESHIVPLSRQALEVL 294
            T VRT ELR A   +FD + G WRVP +     R +++ Q      +++PLS QA+ ++
Sbjct: 241 LTGVRTGELRAATPDQFDFDKGIWRVPPEGVKQLRNRVRTQGNEIPPYVIPLSTQAIAIV 300

Query: 295 KELKTL-SGGRKFLFPNLRTPDTCMTATTINKALERMGYAGKFSGHGFRATASTMLHELG 353
           + L  L + G ++L  +   P   ++  T+N A+ RMGY G+ +GHG RAT ST L+E+G
Sbjct: 301 QRLMQLRTRGARYLLVHRYEPQEMISENTLNTAISRMGYKGRLTGHGIRATISTALNEVG 360

Query: 354 WNEKAIERQLAHAERNKVKAAYNHAEYLPERREMMQAWSDWIDEL 398
           + E+ IE QL+HA+ N+++AAYNHAEY+  RR MMQ W+D +D L
Sbjct: 361 FVEEWIEAQLSHADSNQIRAAYNHAEYVEPRRRMMQYWADLLDAL 405