Pairwise Alignments

Query, 433 a.a., Integrase from Dechlorosoma suillum PS

Subject, 394 a.a., putative site specific integrase from Klebsiella michiganensis M5al

 Score =  328 bits (840), Expect = 2e-94
 Identities = 162/392 (41%), Positives = 243/392 (61%), Gaps = 7/392 (1%)

Query: 4   PLTDTKVRNAKPAEKPYKLQDGQGLYLDVRPSGAKFWRYRYWITPEKDGIYTIGEYPVVS 63
           PL D ++R AKP  K Y L DGQGL L + P+G+K WR+RY     K  + ++G YP ++
Sbjct: 2   PLNDMQIRRAKPEAKAYTLGDGQGLSLLIEPNGSKSWRFRYRYAG-KPKMISLGVYPTIT 60

Query: 64  LSDARREREWAREQAKQGINPTHAKEAERLRRMGEHANTFEAVAREWIDQNRNHWTEKYL 123
           L+DAR  R+ AR+   +G NP+  ++ +++    E  + FE +A EW       W+  Y 
Sbjct: 61  LADARSRRDDARKLVAEGKNPSEVRKEQKIALQTESESAFEKIATEWHQMKSAKWSAGYA 120

Query: 124 YQVERFLGNDVFPKIGALPIRMVTSAHLLGIIRTVEERGAKSIAVLIRQWSGQIFRYAVA 183
             +     ND+FP +G  PI  +    LL ++R +E+RGA      +RQ   ++FRYA+A
Sbjct: 121 SDIMEAFQNDIFPYVGTRPIGEIKPLELLNVLRKIEKRGALEKMRKVRQRCSEVFRYAIA 180

Query: 184 TLRADSDPSAPLRGAIKKDPVRHNPPLSKDEIPVMLNKLQKYGGYRGTVLATKLMLYTFV 243
           T RA+ +P+A L  A++     H P L  DE+P  L  L  Y G R   +ATKL++ T V
Sbjct: 181 TGRAEFNPAADLSSALEVHQSNHFPFLKADELPDFLRALHSYTGSRLVQIATKLLMITGV 240

Query: 244 RTVELRKAEWTEFDLEGGEWRVPADRMKMKKQMKVGESHIVPLSRQALEVLKELKTLSGG 303
           RT+ELR A W+EFDL+   W +PA+RMKM++      SH+VPLS QAL++L ELK ++G 
Sbjct: 241 RTIELRAALWSEFDLDNAIWEIPAERMKMRR------SHLVPLSTQALDLLNELKMMTGN 294

Query: 304 RKFLFPNLRTPDTCMTATTINKALERMGYAGKFSGHGFRATASTMLHELGWNEKAIERQL 363
            +++FP    P+  M+  +IN+ ++R+GY GK +GHGFR T ST+LH+  +N   IE QL
Sbjct: 295 YRYVFPGRNDPNKPMSEASINQVIKRIGYGGKVTGHGFRHTMSTILHDQNYNSAWIEIQL 354

Query: 364 AHAERNKVKAAYNHAEYLPERREMMQAWSDWI 395
           AH ++N ++  YNHA Y+ +R+EMMQ +++ I
Sbjct: 355 AHIDKNYIRGTYNHANYISQRKEMMQVYANMI 386