Pairwise Alignments

Query, 361 a.a., outer membrane protein (porin) from Dechlorosoma suillum PS

Subject, 368 a.a., porin from Ralstonia sp. UNC404CL21Col

 Score =  174 bits (440), Expect = 4e-48
 Identities = 137/387 (35%), Positives = 180/387 (46%), Gaps = 45/387 (11%)

Query: 1   MQKKFIALAVAALASGAAFAQSNVQVYGVADFGLAVNGSALNGTTTGQNTRF--DSGIAS 58
           M+ K  A AVAALA+G A+AQS+V +YGV D GL         T     +RF  DSG  S
Sbjct: 1   MKMKLFAAAVAALAAGGAYAQSSVTLYGVVDAGLTYANKVPGATAGSSGSRFGLDSGGLS 60

Query: 59  GSRLGFKGTEDLGNGLKALFNFEMGLTLDDGASAQ-GRTFGRQSYVGLTGGFGTVIGGRI 117
           GSR G +G EDLG GLK +FN E G  LD G S Q GR FGR +YVGL G +G +  GR 
Sbjct: 61  GSRWGLRGVEDLGGGLKGIFNLESGFNLDTGTSGQGGRLFGRNAYVGLQGQWGQLTLGRQ 120

Query: 118 YTPHYTLMAQIDPFGVGTAGRANNLFASSSLAAGLYDPIRVNNTVAYVSPSFSGLSVTAA 177
               Y      DP  + T     +L +     AG     R +N+V Y+  +F GLSV+A 
Sbjct: 121 QNLLYDFSLIYDPMAIAT---RYSLASQDQFFAG-----RADNSVKYIG-TFGGLSVSAL 171

Query: 178 YGTNSLDNQESAANTSNQNRLFAIAPTYTNGPLTVGLNYHQVKLDGNALIGGAGSDGKLS 237
           Y  N   N+ + +N +   R +++   Y  GPL +G  Y Q            GSD K  
Sbjct: 172 YSFNYNGNEVAGSNKT--GREWSLGANYAGGPLGIGAVYDQTNST------TVGSDNKEQ 223

Query: 238 SYTLAGKYDFGVLALSGAYGSNK-----VEANGNDADKVRNWLIGVSAPIGAKVVLKASY 292
             T+AG Y FG   L   Y   K     V  NGN    +    +G  A     +   A Y
Sbjct: 224 RATIAGTYAFGPAKLYAGYRWYKANYATVAGNGNLRSNLYWAGLGYQATPALSLTGTAYY 283

Query: 293 NNLKDKLNDNADAKQFAIGADYLLSKRTKLY--TAFSKIS----------NDDNAAYTV- 339
              K+  +   +   F +G DY LSKRT  Y   A++K S          ND + A T  
Sbjct: 284 QQFKN--SGTGNPWLFVVGTDYALSKRTDAYFNLAYAKNSGGSGLGVIGLNDASYAGTTL 341

Query: 340 ---AHASGGSGNNESQF--NLGINHSF 361
              +    G  N+ +QF   +G+ H F
Sbjct: 342 TNGSQVFSGPNNSNNQFGATVGLRHKF 368