Pairwise Alignments

Query, 361 a.a., outer membrane protein (porin) from Dechlorosoma suillum PS

Subject, 392 a.a., porin from Ralstonia sp. UNC404CL21Col

 Score =  127 bits (319), Expect = 5e-34
 Identities = 109/378 (28%), Positives = 170/378 (44%), Gaps = 55/378 (14%)

Query: 1   MQKKFIALAVAALASGAAFAQSNVQVYGVADFGLAVNGSALNGT--------TTGQNTRF 52
           M+K  +ALAV    +G A AQS+V +YGV D  +     A   T        ++G     
Sbjct: 1   MKKSLLALAVLGTFAGVAQAQSSVTLYGVVDANVEYVNHAQAVTAAGVVIPGSSGSRLAM 60

Query: 53  DSGIASGSRLGFKGTEDLGNGLKALFNFEMGLTLDDGASAQG-RTFGRQSYVGLTGGFGT 111
            +G  S +R G +G ED+G GLK LF  E G  +D G   QG R FGRQ++VGL G +G 
Sbjct: 61  QAGGLSSNRWGLRGVEDIGGGLKGLFVLESGYGMDTGTLQQGGRLFGRQAFVGLQGNWGK 120

Query: 112 VIGGRIYTPHYTLMAQIDPFGVGTAGRANNLFASSSLAAGLYDPIRVNNTVAYVSPSF-- 169
           +  GR YT  + +MA   P G  T                 Y+P+     V  + P+F  
Sbjct: 121 ITLGRQYTTIFDMMANFSPTGYATQ----------------YEPV-----VGQLGPNFRE 159

Query: 170 -SGLSVTAAYGTNSLDNQES---AANTSNQNRLFAIAPTYTNGPLTVGLNYHQVK-LDGN 224
            + +  T A+G  +++   S    A +   N  + +   Y  GP  +G+ Y +VK L   
Sbjct: 160 DNVIKYTGAFGPLTVEGHWSFGERAGSQTANSAYGVGANYFGGPFGLGIAYDEVKVLTAA 219

Query: 225 ALIGGAGSD-GKLSSYTLAGKYDFGVLALSGAYGSNKVEANGNDA------DKVRNWLIG 277
             +GG G++  K     +A  Y  G + + G Y   K +   + A       +   +  G
Sbjct: 220 EALGGPGNEYAKDKRAAIAASYTVGPVKVMGGYRYGKTDTASSGATLALLPHRDDYYWAG 279

Query: 278 VSAPI--GAKVVLKASYNNLKDKLNDNA-----DAKQFAIGADYLLSKRTKLY--TAFSK 328
           V+  +     + L   Y+N+K+     A     + +Q+   ADY  SKRT +Y   A+++
Sbjct: 280 VNYQVTPALGLTLAYYYDNIKEATIGGATVNPRNPQQWQFIADYNFSKRTDVYLSAAYAR 339

Query: 329 IS--NDDNAAYTVAHASG 344
            +  N D+  Y    A+G
Sbjct: 340 NASLNWDSIGYVTNPATG 357