Pairwise Alignments

Query, 361 a.a., outer membrane protein (porin) from Dechlorosoma suillum PS

Subject, 381 a.a., porin from Burkholderia phytofirmans PsJN

 Score =  134 bits (336), Expect = 5e-36
 Identities = 125/399 (31%), Positives = 172/399 (43%), Gaps = 56/399 (14%)

Query: 1   MQKKFIALAVAALASGAAFAQSNVQVYGVADFGLAVNGSALNGTTTGQNTRFDSGIASGS 60
           M K+ I   +A+  + +A AQS+V +YGV D G        N  +  +     SG A GS
Sbjct: 1   MNKRIIPALMASALATSAMAQSSVTLYGVIDEGFDYT----NNVSGSKVYELQSGFAQGS 56

Query: 61  RLGFKGTEDLGNGLKALFNFEMGLTLDDGASAQGRT-FGRQSYVGLTG-GFGTVIGGRIY 118
           R G KGTEDLG GL+A+F  E G  L++G   QG   FGRQ+YVGLT   FGTV  GR Y
Sbjct: 57  RWGLKGTEDLGGGLRAVFQLENGFNLNNGRLGQGGLMFGRQAYVGLTSDSFGTVTLGRQY 116

Query: 119 TPHYTLMAQIDPFGVGTAGR--ANNLFASSSLAAGLYDPIRVNNTVAYVSPSFSGLSVTA 176
                  + +D  G  TA    A  LF+    +    +  RVNNTV Y SP F GL    
Sbjct: 117 D------SVVDYLGPVTANGNWAGYLFSHPYDSDNTDNTFRVNNTVKYTSPLFGGLQFG- 169

Query: 177 AYGTNSLDNQESAANTSNQNRLFAIAPTYTNGPLTVGLNYHQVKLDGNALIGGAGSDG-- 234
             GT S  N    AN    NR ++   TYT G L +   Y Q     +A  GGA ++G  
Sbjct: 170 --GTYSFSNDSGFAN----NRQYSAGGTYTVGGLVLAAAYLQAN-SPSATAGGAINNGGD 222

Query: 235 ------KLSSYTLAGKYDFGVLALSGAYGSNKVE-------------ANGNDAD-KVRNW 274
                  L  +     Y FG+  +  AY ++ V              A+G  +  + +N+
Sbjct: 223 ENFVANALRVFGAGASYTFGLANVGFAYTNSYVRRPVSSGYVGAITPASGTLSSLRFQNF 282

Query: 275 LIGVSAPIGAKVVLKASYNNLKDKLND-----NADAKQFAIGADYLLSKRTKLYT--AFS 327
            +           + A Y   +   N      N   +   +  DYLLSKRT +Y    + 
Sbjct: 283 EVNGKYQFTPAFYVGAMYVYTRTDFNSSGGQLNPIYQSVGLMGDYLLSKRTDVYVQGVYQ 342

Query: 328 KISNDD-----NAAYTVAHASGGSGNNESQFNLGINHSF 361
            +  D      + AY        SG N+    + + H F
Sbjct: 343 HVGGDRTGTVLDVAYIPGADGVSSGGNQVVVRVALRHKF 381