Pairwise Alignments

Query, 361 a.a., outer membrane protein (porin) from Dechlorosoma suillum PS

Subject, 389 a.a., porin from Burkholderia phytofirmans PsJN

 Score =  135 bits (339), Expect = 2e-36
 Identities = 122/403 (30%), Positives = 177/403 (43%), Gaps = 56/403 (13%)

Query: 1   MQKKFIALAVAALASGAAFAQSNVQVYGVADFGLAVNGSALN----GTTTGQNTRFDSGI 56
           M+K   AL++    +    AQS+V +YG+ D G+ +N +A N        G+    DS  
Sbjct: 1   MKKSLFALSILGTFAATVHAQSSVTLYGIVDEGVMINTNAKNVVKGKNVGGRQFSVDSNA 60

Query: 57  AS-GSRLGFKGTEDLGNGLKALFNFEMGLTLDDGASAQGRT-FGRQSYVGL-TGGFGTVI 113
            + GSR G +G EDLG GLKA+F  E G+ +  GA  QG T FGRQ+YVGL +  FG+V 
Sbjct: 61  GTQGSRWGIRGAEDLGGGLKAIFVLESGINVSTGAFGQGGTAFGRQAYVGLASSSFGSVT 120

Query: 114 GGRIYTPHYTLMAQIDPFGVGTAGRANNLFASSSLAAGLYDPI----RVNNTVAYVSPSF 169
            GR Y         I+ + VG  G A     S++   G  D +    R N+T+ Y SP+F
Sbjct: 121 LGRQYD-------SINDY-VGNYGYAAAYGGSTTEHPGDLDNVNHTFRANSTIKYASPNF 172

Query: 170 SGLSVTAAYGTNSLDNQESAANTSNQNRLFAIAPTYTNGPLTVGLNYHQVK--------L 221
           +GL+     GT SL      A   +Q+  +++   Y +GP  +G+ Y   K        L
Sbjct: 173 NGLTFG---GTVSLG---GVAGEISQSSGYSLGANYGHGPFGIGVAYELFKNPSALGSLL 226

Query: 222 DGNALIG----------GAGSDGKLSSYTLAGKYDFGVLALSGAYGSNK---VEANGNDA 268
           + NA             G      L   T  G YDFG   +   Y + K   + A G   
Sbjct: 227 NSNANAATFNSLNSGYLGTKPANSLQIITTGGSYDFGPAKIGAVYSNTKYMNIGAFGGAT 286

Query: 269 DKVRNWLIGVSAPIGAKVVLKASYNNLKDKL--NDNADAK--QFAIGADYLLSKRTKLY- 323
             + ++ +           +   YN  K      D  D K  QF++  DY LSKRT +Y 
Sbjct: 287 ATLNSYELNALYRFTPAFSVSGEYNYTKGNAVRGDLGDQKYNQFSLLLDYALSKRTDVYF 346

Query: 324 -----TAFSKISNDDNAAYTVAHASGGSGNNESQFNLGINHSF 361
                TA    S    A   +      S N+++   + I+H F
Sbjct: 347 LGTFQTASGTSSTGAAAVADIGGLGDSSNNHQAVARVAIHHKF 389