Pairwise Alignments

Query, 361 a.a., outer membrane protein (porin) from Dechlorosoma suillum PS

Subject, 389 a.a., porin from Burkholderia phytofirmans PsJN

 Score =  139 bits (351), Expect = 1e-37
 Identities = 115/407 (28%), Positives = 177/407 (43%), Gaps = 64/407 (15%)

Query: 1   MQKKFIALAVAALASGAAFAQSNVQVYGVADFGLAVNGSALNGTTTGQNTRFD--SGIAS 58
           M+K  +ALA     +G A AQS+V +YG+ D G  +N      T +G    ++  SG+  
Sbjct: 1   MKKSLLALAALGAFAGVAHAQSSVTLYGIIDEGFNIN------TNSGGKHLYNLSSGVLQ 54

Query: 59  GSRLGFKGTEDLGNGLKALFNFEMGLTLDDGASAQ-GRTFGRQSYVGLTGGFGTVIGGRI 117
           GSR G +GTEDLG GLKA+F  E G  +++G   Q G  FGRQ+YVGL+  FGTV  GR 
Sbjct: 55  GSRFGLRGTEDLGGGLKAIFVLENGFDVNNGKLGQGGLMFGRQAYVGLSSQFGTVTLGRQ 114

Query: 118 YTPHYTLMAQIDPFGVGTAGRANNLFASSSLAAGLYDPIRVNNTVAYVSPSFSGLSVTAA 177
           Y    +++  + P   G       + A         +  R NNTV Y S ++ GL+    
Sbjct: 115 YD---SVVDYVGPLEAGDQW-GGYIAAHPGDIDNFNNAYRTNNTVKYTSANYGGLTFGGT 170

Query: 178 YGTNSLDNQESAANTSNQNRLFAIAPTYTNGPLTVGLNYHQVKLDGNALIGGAGSDGKLS 237
           Y    +      A     N+++++   Y NGPL +G+ Y   +    A  GG  + G  +
Sbjct: 171 YSFGGI------AGNVTSNQIWSLGAGYNNGPLVLGVGYLNARTP--AAAGGLFNTGSTA 222

Query: 238 SYTLA----------------------GKYDFGVLALSGAY--------GSNKVEANGND 267
           +   A                      G Y FG   +   Y        G++        
Sbjct: 223 AAPAAAVTSPIYAGFTSANTYQVIGAGGAYTFGAATIGATYSNIRFGNLGASYASPFKGQ 282

Query: 268 ADKVRNWLIGVSAPIGAKVVLKASYNNLKD-KLNDNADAK--QFAIGADYLLSKRTKLYT 324
           +    N  +     +   +++ A+Y+  +  ++N N+ A+  Q A+G DY LSKRT +Y 
Sbjct: 283 SATFNNAELNFKYQLTPALLVGAAYDYTRGAEINGNSRAQYHQGAVGVDYFLSKRTDVYV 342

Query: 325 --AFSKISNDD--------NAAYTVAHASGGSGNNESQFNLGINHSF 361
              +     D         +A   +   SG S  N+    +GI H F
Sbjct: 343 TGVYQHALGDTVTAGGAVVDATAGINGLSGSSNQNQFTARIGIRHKF 389