Pairwise Alignments

Query, 339 a.a., D-alanyl-D-alanine carboxypeptidase from Dechlorosoma suillum PS

Subject, 294 a.a., murein-DD-endopeptidase, Serine peptidase, MEROPS family S11 from Pseudomonas syringae pv. syringae B728a

 Score =  223 bits (567), Expect = 6e-63
 Identities = 123/284 (43%), Positives = 171/284 (60%), Gaps = 20/284 (7%)

Query: 52  SKPATASKPKVISQNVRNSNVRRASAVPADFGEAQRLAVQSSAALVLDQGNGEVIYQKNA 111
           S P  A++P V+S++  N                  L + S +A+V+D    +V+Y  N 
Sbjct: 3   STPTLANEPAVLSRDPSN------------------LHLASGSAMVIDLQTDKVLYSSNP 44

Query: 112 SAVVPIASITKLMTAMVVLDSQPNLSAPVTIGEEDIDTLKGSRSRLSVGTVLTREHALLL 171
             +VPIAS+TKLMTAMVVLD++  +   + +       +KG  SR+ +G+ + R   LL+
Sbjct: 45  DVIVPIASVTKLMTAMVVLDAKQPMDEVIPVNISQTPEMKGVFSRVKLGSEMNRRDMLLI 104

Query: 172 ALMSSENRAAHTLARHYPGGLHAFVEAMNRKARSLGMMDTHFQDPTGLTSNNVSTANDLA 231
            LMSSENRAA +LA  YPGG  AF+ AMN KA++LGM  T + +PTGL+  NVSTA DL 
Sbjct: 105 TLMSSENRAAASLAHSYPGGYPAFILAMNAKAKALGMKHTAYVEPTGLSVYNVSTARDLT 164

Query: 232 KMVAAAHTYPLIREFSTTSGAMV--ETNGRLLEYHNTNALVKSTTWDIGLSKTGYIQEAG 289
           K+V AA  YPL+ E STT    V        L + NT+ LV+   WDI L+KTG+  +AG
Sbjct: 165 KLVMAARKYPLLSELSTTEQKTVTFRKPTYTLGFSNTDHLVRKDNWDIKLTKTGFTNQAG 224

Query: 290 KCLVMQARVAERPVVIVLLDSAGKMTRIGDANRIKRWMESASLG 333
            CLV+   +A RPV +V+LD+ GK T   DA+RI++WME+   G
Sbjct: 225 HCLVLLTSMANRPVSVVILDAFGKYTHFADASRIRKWMETGQSG 268