Pairwise Alignments

Query, 547 a.a., methyl-accepting chemotaxis protein from Dechlorosoma suillum PS

Subject, 541 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2C3

 Score =  235 bits (599), Expect = 4e-66
 Identities = 154/543 (28%), Positives = 278/543 (51%), Gaps = 8/543 (1%)

Query: 3   RKLTVGGRLALGFGIFSLILTAAVLVALQALARVNEQVEKMAAKDWQKVEMAKDIAYAAN 62
           R+L +  R ALGF + ++++    + AL  ++ + +  E      W       D      
Sbjct: 4   RQLNIAPRAALGFALIAVLVALLGVFALGQMSSIRDS-EVAVETQWLPSIRGGDEIREWM 62

Query: 63  DVARTV---FSLFHDTSRLAEQKQKIVGYRDMVNQRLDILEKLLYRPKGKQLVADLKTKR 119
              RT+    +L  D   +   + ++      + +++   EKL+  P+G+ L    K   
Sbjct: 63  LRIRTISLRMALDQDPKNIPVYRGQMDTRDKELGEKIAAYEKLVVTPEGRALYDQFKQTF 122

Query: 120 LAFAGTYPKVLELLEAGRREEASRLFASEGMPQLEAYVQAVDAFVAFQGELFEESAVTAR 179
            A+     +   L E GRR+E  +L   +    ++   + ++       +     +  ++
Sbjct: 123 AAYRTGIAQSFTLAEQGRRDELIKLLLVDMKTVVDGSGKQLNDLAELFSKQVSIESQKSQ 182

Query: 180 EVYAQARNLMLVFLAAAIVLATALALWIIRSVTRPLGGEPEEAKALVQRLAEGDLSADLR 239
           E YA +R ++ +F+  A +    LA+ + RS+ +PLG     A+++    A GDL+  + 
Sbjct: 183 EHYANSRMIVSLFVVLAALATVVLAMLLTRSIVKPLGAALNAAESV----ARGDLTRPIE 238

Query: 240 LHPQDRGDSLMAALATMRNSLRAMVGEIQGNAGEVSEAARDLSVNSVQLAQSSATQSEAT 299
            H  D    L+ ALATM+ +LR  +  I G+A +++ AA +L+  ++    S   Q+   
Sbjct: 239 THGNDEVSRLLKALATMQQNLRETLQGISGSAAQLATAADELNAVTLDSTHSLQQQNNEI 298

Query: 300 AAMAAAVEQVTVSIAQVSDSASHTHAISDSTGQLSGDGHDVILRTVAEMQAVAVAVGGAA 359
              A AV ++T ++ +V+ +A  T   +  + + +  G   +  TV  + A+A  V    
Sbjct: 299 EQAATAVTEMTTAVEEVARNAVSTSDATRQSSESASLGQQRVSDTVDAIGALASDVQVTG 358

Query: 360 RSIEAMGSRSEQISSVVQVIRMVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLAE 419
             ++++ ++S+ I  V+ VIR +AEQTNLLALNAAIEAARAGE+GRGFAVVADEVR LA 
Sbjct: 359 GLVQSLANQSQDIGKVLDVIRAIAEQTNLLALNAAIEAARAGESGRGFAVVADEVRALAY 418

Query: 420 RTALATTEISDMIAGVQDAAREAVDAMGGATARVEQGVAMAEQASDSMQAIRSSSQEVVA 479
           RT  +T EI  M+ G++  A +A+D+M  +++R    +AMAE+A D++Q I +S  E+  
Sbjct: 419 RTQQSTQEIEQMVQGMRSGATQALDSMQASSSRAASTLAMAERAGDALQTITASVNEIHE 478

Query: 480 AVNTIADALREQKHAGGDISANVEKVAQMVEENSAATHEAADTARRLEALAQALHQTLRR 539
               IA A  EQ     ++  N+  +  +   +++   + + ++  L  LA +L   ++R
Sbjct: 479 RNLVIASAAEEQAQVAREVDRNLVNIRDLSVRSASGADQTSASSHELSQLANSLRTMVQR 538

Query: 540 FRL 542
           F++
Sbjct: 539 FQV 541