Pairwise Alignments

Query, 547 a.a., methyl-accepting chemotaxis protein from Dechlorosoma suillum PS

Subject, 541 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2C3

 Score =  213 bits (543), Expect = 1e-59
 Identities = 158/561 (28%), Positives = 267/561 (47%), Gaps = 44/561 (7%)

Query: 3   RKLTVGGRLALGFGIFSLILTAAVLVALQALARVNEQVEKMAAKDWQKVEMAKDIAYAAN 62
           R + +  R  LGF +   ++ A  + AL  ++++    E +A      ++       A N
Sbjct: 4   RNMNIAPRAFLGFALIGALMLALGVFALSQMSKIRTSGESIAQNSVPSIK-------ALN 56

Query: 63  DVARTVFSLFHDTSRLAEQKQKIVGYRDMVNQRLDILEKL--LYRPKGKQLVADLKT--- 117
           +  +    L            +++ YR +VN+  DI +K   L   + +Q+ A   T   
Sbjct: 57  EFTQLTLRL------------RVLSYRLLVNREPDIQQKTYDLLEQRSQQIRAAQTTYEK 104

Query: 118 ------KRLAF------AGTYPKVLELLEAGRR----EEASRLFASEGMPQLEAYVQAVD 161
                 +R A+       G Y ++ E ++   R    +E   L  +E +   +A   A+D
Sbjct: 105 LISASDERAAYDQYVQLLGQYRQLEERMKTLSRNNQVDELRALLNTELLSNSDAINAAID 164

Query: 162 AFVAFQGELFEESAVTAREVYAQARNLMLVFLAAAIVLATALALWIIRSVTRPLGGEPEE 221
             V       E     A + Y+ A N ++  L  A  L    A  +  S+T+P+    + 
Sbjct: 165 HLVEINNLQAEALNKGAAQQYSSAFNWVVALLVIATGLTLLFAWLLTNSITKPIANALDA 224

Query: 222 AKALVQRLAEGDLSADLRLHPQDRGDSLMAALATMRNSLRAMVGEIQGNAGEVSEAARDL 281
           A    + +A+G+L+  + +   D    L+ A++TM+  LR  +  I G+A +++ AA +L
Sbjct: 225 A----EEIAKGNLTRPITVDGSDEAGRLLRAMSTMQEKLRDTLQRISGSATQLASAAEEL 280

Query: 282 SVNSVQLAQSSATQSEATAAMAAAVEQVTVSIAQVSDSASHTHAISDSTGQLSGDGHDVI 341
           +  + + A+    Q+      A AV ++T ++ +V+ +A  T   S      +GDG D++
Sbjct: 281 NAVTDESARGLTQQNNEIEQAATAVNEMTSAVEEVARNAVSTSEASKHATTSAGDGRDLV 340

Query: 342 LRTVAEMQAVAVAVGGAARSIEAMGSRSEQISSVVQVIRMVAEQTNLLALNAAIEAARAG 401
             TV  ++ ++  V   A  I  + + S  I  V+ VIR +A+QTNLLALNAAIEAARAG
Sbjct: 341 QETVGAIERMSADVQSTATLIGNLANESRDIGKVLDVIRGLADQTNLLALNAAIEAARAG 400

Query: 402 EAGRGFAVVADEVRKLAERTALATTEISDMIAGVQDAAREAVDAMGGATARVEQGVAMAE 461
           EAGRGFAVVADEVR LA RT  +T+EI  MI  +Q     AVD+M  +T R E  + +A 
Sbjct: 401 EAGRGFAVVADEVRALAHRTQQSTSEIERMIGSIQSGTEHAVDSMRNSTERAESTLNIAR 460

Query: 462 QASDSMQAIRSSSQEVVAAVNTIADALREQKHAGGDISANVEKVAQMVEENSAATHEAAD 521
            A  S+  I ++  E+      IA A  EQ     ++  N+  +  +  +++   ++   
Sbjct: 461 GAGLSLDTINTAIVEINERNLVIASAAEEQAQVAREVDRNLVNIRDLSVQSATGANQTTA 520

Query: 522 TARRLEALAQALHQTLRRFRL 542
            +  L  LA  L+  + RF L
Sbjct: 521 ASAELSRLAVDLNSMVGRFSL 541