Pairwise Alignments

Query, 547 a.a., methyl-accepting chemotaxis protein from Dechlorosoma suillum PS

Subject, 541 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2E3

 Score =  206 bits (523), Expect = 2e-57
 Identities = 143/540 (26%), Positives = 257/540 (47%), Gaps = 6/540 (1%)

Query: 3   RKLTVGGRLALGFGIFSLILTAAVLVALQALARVNEQVEKMAAKDWQKVEMAKDIAYAAN 62
           R + +  R  LGF   +L++    + A+  ++ + +    M +     V    ++  +  
Sbjct: 4   RNMNIAPRAFLGFAFIALLVIVLGVFAVNRMSIIRQASIDMESNQLPSVAFLGNMTESVL 63

Query: 63  DVARTVFSLF--HDTSRLAEQKQKIVGYRDMVNQRLDILEKLLYRPKGKQLVADLKTKRL 120
            +    F +    D + L + + +I    D   Q       L   P+   L         
Sbjct: 64  RLRILSFRVLVNRDAAGLQDAETRINVLTDKARQAQKSYAALPAGPEEAALYKTFAATLD 123

Query: 121 AFAGTYPKVLELLEAGRREEASRLFASEGMPQLEAYVQAVDAFVAFQGELFEESAVTARE 180
           ++     +++EL    + ++   L  +      +     ++  +         +   A +
Sbjct: 124 SYLQAQSQMMELSRQNKVDDLRNLINTRIKDGTDLMGVQLNKLIDINKAGATAADAVAGD 183

Query: 181 VYAQARNLMLVFLAAAIVLATALALWIIRSVTRPLGGEPEEAKALVQRLAEGDLSADLRL 240
            Y+ A N ++     A ++   LA  + RS+  PL      A A  + +A G+L+  + +
Sbjct: 184 QYSFATNGIIAVSVFAALVTVLLAWLLTRSIVTPLN----RAVAAAESIAGGNLAKPIEV 239

Query: 241 HPQDRGDSLMAALATMRNSLRAMVGEIQGNAGEVSEAARDLSVNSVQLAQSSATQSEATA 300
             +D    L+ AL+TM+ +LR  + +I G+A ++  AA +LS  + + ++    Q+    
Sbjct: 240 DGKDEPARLLGALSTMQANLRKTIEQIAGSANQLGAAAEELSAVTEEASRGLQQQNNEIE 299

Query: 301 AMAAAVEQVTVSIAQVSDSASHTHAISDSTGQLSGDGHDVILRTVAEMQAVAVAVGGAAR 360
             A AV ++T ++ +V+ +A  T   S+ + Q + +G D ++ TV  +Q +   V   + 
Sbjct: 300 QAATAVNEMTAAVEEVARNAVSTSEASNQSTQAAREGRDRVVETVNAIQTMTHDVQSTSL 359

Query: 361 SIEAMGSRSEQISSVVQVIRMVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLAER 420
            IE + ++   I  V+ VIR +AEQTNLLALNAAIEAARAGEAGRGFAVVADEVR LA R
Sbjct: 360 MIEGLATQGRDIGKVLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHR 419

Query: 421 TALATTEISDMIAGVQDAAREAVDAMGGATARVEQGVAMAEQASDSMQAIRSSSQEVVAA 480
           TA +T EI  M+AG+Q+   EAVD+M  +  R    + +A  A  +++ I  S  ++   
Sbjct: 420 TAQSTQEIEKMVAGIQNGTGEAVDSMQQSNQRTHTTLELARAAGVALEQITQSIHQINER 479

Query: 481 VNTIADALREQKHAGGDISANVEKVAQMVEENSAATHEAADTARRLEALAQALHQTLRRF 540
              IA A  EQ     ++  N+  +  +  +++A  ++ +  +  L  LA  L+  + RF
Sbjct: 480 NLVIASASEEQAQVSREVDRNLVNIRDLATQSAAGANQTSAASHELSRLAVDLNAMVARF 539



 Score = 41.2 bits (95), Expect = 1e-07
 Identities = 46/212 (21%), Positives = 82/212 (38%), Gaps = 39/212 (18%)

Query: 343 RTVAEMQAVA-------VAVGGAARSIEAMGSRSEQISSVVQVIRMVAEQTNLLALNAAI 395
           R VA  +++A       + V G       +G+ S   +++ + I  +A   N L   A  
Sbjct: 220 RAVAAAESIAGGNLAKPIEVDGKDEPARLLGALSTMQANLRKTIEQIAGSANQLGAAAEE 279

Query: 396 EAARAGEAGRGFAVVADEVRKLAERTALATTEISDMIAGVQDAAREAVDAMGGATARVEQ 455
            +A   EA RG     +E+ +       A T +++M A V++ AR AV            
Sbjct: 280 LSAVTEEASRGLQQQNNEIEQ-------AATAVNEMTAAVEEVARNAVST---------- 322

Query: 456 GVAMAEQASDSMQAIRSSSQEVVAAVNTIADALREQKHAGGDISANVEKVAQMVEENSAA 515
               +E ++ S QA R     VV  VN I             ++ +V+  + M+E  +  
Sbjct: 323 ----SEASNQSTQAAREGRDRVVETVNAIQT-----------MTHDVQSTSLMIEGLATQ 367

Query: 516 THEAADTARRLEALAQALHQTLRRFRLEAHSA 547
             +       + A+A+  +       +EA  A
Sbjct: 368 GRDIGKVLDVIRAIAEQTNLLALNAAIEAARA 399